| Id Trinity | TRINITY_DN47545_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_525257 |
| Sequence | GTTGATTTATATTATTTTTATTTGAGAGTCATTAATAGTTATTCTACCACCTTTCTCCTTTTTGGAAGAGAATCTTCTTCACCTTAAATTAATATACCCC TACTCTTTAAAAAAATCAATTACAAGTCTGGCTTCCCTTTTCTAATTTGACCTCAATCTTTCCAATTTTGAAGCTTATGTGTAAAGAGAAATTAGATAAT TGATTTATCTGTATATAGTGGTTTAAGATTATTAAAGCAGTTATATAATAGAATGGGCCATTGGCCCAAAACAGGTGTCGCTGTAGATATAAGTAACGAA TCGAAAGTTGAATGATTGAATTAATCGAAATTGAAAATCATCATCAACATCGATGGATCTGGAGGTAGTTGGGCGTCACGCGATGCTGTTCGACGATGAC AGCTTGGCGGCGTTTGTGAACTCACCTTCTGCTCTCGTCGATTGGAACTCTCTCTCTATTGATCGCTACGATGTTCGCCACCTCCTCCCTTCTCCGCTTC CACCTCGCCGCCATCTTCACCGCCCTTCCCTTCAACCTTACCTTGACCACGAACGCTATCTCTATCTCCCTTCTTCTTCTCCCAACCAACAACCACAAGA TGATGGTTCAGATCCAGTGATCTCGGATGGGGATGGCTATCGTGCTGTTCCGTTTAAATATGCAAATCCTAATGACCCGGCTGAGACAAGAGACAGTGAT ACGGAGTCTGCATATCGTCCTCCCTTCCCTGTACCAGAAAGATTACTCCATAGTCTGGTTAGTGACCTCAGTCTTAACATTTATTTTCGTCGTGTGATTT TCAGATGTTACAGATTTATTTAACCTTTTAATTTCTTAACCAGTGTGATTAGGTGATAATTGTCTAGGGTGCATATGTTATTCTAAGGCTTACAATGTCT AAGTTTCAGATGCTTGGAGCATAAATGGAGTTCTTGTGACTCAAGGTAGCCATTCTCAGGCACCTTGTTTCCTTTTGATGTCATGAGAAGGGTCTGTGCA GGTTGGATTAGGATGATAGAAATTGGTTGATTCTTTACCTCGAGAGCAAATGGGATGAAATTTATCTTCTTAAAGTCCTGTTTCTTGATCTTTATGGTTA TGCAAGTATATTTGAGGTTATCTTATGTTTGTTTAGTGAGATATTTATGTATTTCTGCCTGCGAAGACCTTTTAAAAGTTATATTTATGCTAATTTTTTG AAATTCACACTTATTGATGAAGAAACCTTTTTTGTTTGTATTTTCAGCCTCCAAACGAGAAGGTACATCAGATTATCTCAAGGACTGCAATTTTTGTCAG CAAACATGGAAGCCAGTCAGAAATTGTCCTGAGGGTGAAACAAGGAAACAATCCAACATTTGGGTTCCTGATGCCTGATCATCATCTTCATGCATATTTT AGGTTTCTTGTTGATCATCAAGAACTTTTGAAAGGTGACAAAGATGATACCATCGGCAACCCATCTGTTGACAAGAATAAAAGTCAGGGGCTTGACCAAA CAGGTGGTGCATTGTCTTTGCTTGGATCAGTTTATGGATCTGGAGAGGATGAGGATGGTACAACCGATAATACTCATGACTTCAAGAGAAACGAATGTGA AGGAGCTGTTGATGCTGTTAGTGCTCATGATTCTGCAGGAGTAGAACCCGCAGAGTCATCTCCAGATGCAGCCAAGAAGGATGGAAGCATTTCTAGAAGT CCGATATCTTCGAAAGAAAATGTTCCTGTCATTAAGCGGAACCAGCCTATCAGTACTGTCAAGGCAGCAATCGCAGCTAGGGCAAAAACAACTGATGCAT TGGATTTAGTGTCTAATGTGGTAGACAAATCACAGGTTTCTGTGCCCAATAAAGTTAAGATTGAACTACCCGTTGTGGAGCCCCCATCTAGCATAAAGGA AGTTATTGAGAAGGTGGTTGAGTTCATTTCAAAAAATGGAAAACAATTTGAGGCTGTTCTTGCTGAACAGGATCGTGCTAATGGAAGGTTCCCATTTCTT GTGCCGTCTAATCGATATCATACCTATTATCTGAAAGTTCTTCAAACTTCTGAAGATGTATGTTTCTCAGAATAATTAAAATTTGCTACAATTTCTTTTA TCTGTTCCATGCGATTCGTATCCTACTTTGAGAATCAATAATTTCACTTTACACTTTTATAGGGCATGATCTACGTCATGCTATCATTGTATTCCTTCTA CCCTAGCTCTTCACTGAAGCTAAAATATAATTTCATTTACAGAGATCATCAGCCATTGGCTTGTCCACTAATGTTGGTTATTCTCACTAGTCATTGGTTC ATGTTTGTATTTCTGTATGTGATGCGGATTTGTGTTAATTTATGAATCTTCAAAGTATTCATGCATGTTCGGGGAGATATTTTTGTGCAGTGGGTGAATT CCATGGTTTATTTTTGGGCATCATTGTGTGATTAATTCTAAGATATTGTTGAATTTAACTTTCAACTGCAACTTACTGGTCTTTTCAATTGCTTACAGTC TAAGTTACCAGGCAAGGGCTTGCAAAGGCACAATTCAGCAGGTCGTTCAGGGGACAATAATTCTATTGCACACGAAGAAAGTGATAATTCTTCATTTGGA TCTGTGAGCTCTGATATACCACATGATATGGACCGCAAAGAGAAGTTTAAGTCGATTGTCAGAAAGTCGAAGAAGGATGGTCAAGATGCAACTCCCGAAG ACATCCAAACTCAGACCATGGTGTGCATGGATGCAGCAGCAGCTGCTGCTATTCTTCAGGCTGCCACTAGGGGTATTAAAAACCCTAATTTAGAAATATT TAGCAAGACATCAAGTGGTAGCAGTCAAGGCCTTGGAAGTTATGTCAAAAGCCCAAATCTGAATGCAGAGGATAGTGCTTCTGTCCCTGTTGGCAAGGCT ATTCGAGAAAAGGTCAATATTGCTGTAGCAGGTGAGGCAGACTCCTCTGAAGCAAATATGACTAAAGAGAAGATTAAGGCAGAGAGACTGAAACGAGCGA AGATGTTTGCAGCCATGATAAAAAGCAGAGCTGAGCCACTCAAGAGTGAAGTCCCACGTGGTTTATCAGTTGAGCCACCAGGCTATGGACTTTCAAGTTC AGATGCTGAGACTGGGAATCTTATGGGTGAAGAAAGAAAAGGAAGTTCTGTTCCACTAGATGTTGATAATTCAGATAAAAGTCAGAAGTCTGAGGAGAAA CTTTCTGTTGATAAATCAAACGAAAGTCACAAATCTAAGGAGAAACTTGCTGTTGATAACGATGAACGGCGGTCGAAAAGAAAGTACCGTTCAAGATCCA GTAGACATGAGGAGGAGGAGGAGGAGGAGGAGGAGATGGTGGCGGCGAAGATGGAGGGAGAAAGAAGGAGGCGATATTGGTATTGGCAGAGGCAGGGAGG TCAGTGGAGAGTTTGCCAGGTGACTTGGCGGCGGCCGTAAAAGAAGGGAGGATCGGAGGTGCGGTGGTGAGTCGGTTACTGGAAATGGAGAAATCAGCGT TGTTGAGATGGTTACTTCAGTTTGGTGGATTCAAGGAACGTCTTCTCGCTGATGATCTCTTTCTTGCTAAACTTGCTATGGAGTGCGGTGTTGGCGTCTT CACCAAGACTGCTGCTGAGTACGACCGCAGGAGAGACAAGTTTTTTGATGAGCTGGAAATTGTTTTCGCTGATGTGGTCATGGCCATACTTGCAGATTTC ATGCTGGTTTATCTTCCGGCACCGACTGTATCTCTTAGACCACCACTTGCAATCAATGCAGGCCATATAGCCAAGTTTTTCCACAACTGCCCAGATAATG CATTCCAGGTTGCTCTCTCAGGAACACCATATTCCTTATTACAGAGAATTGGTGCTATTGTGCGTAATGGATCTAAGCTTTTTGCTGTTGGAACTGCTTC ATCCTTGGTTGGGACAGCTGTGACAAATGCCTTAATTAATGCAAAGAAGGCTGTTGATAAATCTTCTGCTGGGGAAGTTGAAAATGTTCCCATATTGTCT ACCAGTGCTGCCTATGGTGTTTACATGGCAGTTTCTAGCAACCTCAGGTATCAAATTGTTGCTGGAGTTATCGAACAGAGGCTTTTGGAACCTATGCTGC ATCAGCACAAGCTTATACTCAGTGCAATGTGCTTTGCTGTTAGGACTGGCAATACCTATTTGGGTTCATTATTGTGGGTGGATTATGCCCGTTGGATTGG GGTCCAGTAGGGCCAAGAGTACAAGACTTTTGCATAACTTTTGTTGATTGAATACAATTTTCTCAACATTTCCATTTGTGAAGAAGTTCACAAATGGAGC ATCACAAAACAATTTATTTACTTGGTAGGGTTGATTTGTAAGATTAGCCCATTACTTTTTCGTTGTTGTTGAGTACTCTGCCTATTGTTTTTCTCACAAC TTTCCTCATTCAAATAATGTTACTAGGATGTCAAACATAATTTCAAACTCAATGGAAGTTTGCAGCAGATTGAATGAAATTTAACTATTTAAGAAACAAG TTATCTTTCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_153472; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_525257
| Blastp | - |
|---|---|
| Blastx | Protein RETICULATA-RELATED 4, chloroplastic from Arabidopsis with 79.43% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019454320.1) |
| Pfam | - |
| Rfam | - |
| GO | - |