| Id Trinity | TRINITY_DN47644_c4_g6_i3 |
|---|---|
| Name Transcript | Ll_transcript_360618 |
| Sequence | ACCAAATAGAGATGAATATTATGAATGTATTAAAATGATGATAGATAAGAGAATAATAATTGCTTAACGAGTAAGAAAGTTTTGTGTATAAATAAATTAA GCTTATTCTTCCTTTGATTCAACGCTTATTCTTGTCTTCTCTGTTGAGATGGCTAATTCTGAAGCGCATGATGTTCAATCCATTCTCTCTTCTCCAAACA GAGACTTTCTCATTCGTAACAACAATGATCAAGTTAAAATTGACAGCTTGAAGGGAAAGAAAGTCGGTATATATTTTTCGGCATCTTGGTGTGGTCCGTG CCGAAAATTCACCCCCTTTTTGGTGGATGTGTACAATGAACTTGCTCCAAAAGGTGACTTTGAGATCATTTTTGTCACAGCTGATGAAGATGACGAGTCC TTTAAGGCGTACTTCTCCAAGATGCCATGGCTTGCGATCCCATTTTCTGATTCAGATACGCGCAACAGCCTTGATGAATTGTTTCAGGTGAAGGGAATTC CCCATCTTGTATTACTTGGTGAAACTGGGGAAGTGTTAACTGATGATGGAACTGGAGTTATTCGTGAATATGGAGTTGAAGGATACCCGTTCACATCAGC GAGGATCCAAGAGTTGGAAGATCAAGAAGCGGAAGCTAAGAGGAACCAGACCTTGACATCTATCTTGACCTCCCCCTCCCGTGACTTTTTGATATCTTCT GATGGAGAGAAAGTAAGCTAGTAACATCGCTCTATTTGTACGAGATATTACTCCACTTTAGTTAATGTCTGGTAGTTTACCAAAACATATTATTCCTTCC CAAATCTGAGTTTTCCTTTTATGTACGTGCAGGTACTTGTCTCCGAGCTCGAGGGCAAGACAGTTGGTCTGTATTTCACATTGACTTCAGACAAAGAATT CGGTGACTTTACTCAACAGCTTGTAGGAGTTTATGAGAAGCTGAAGGAAAATGGAGAGAAGTTTGAGGTTGTGGTGATACCCCTAGATATTGAGGAAGAA TCATTCAAGGAAGGGTTACAATCTATGCCTTGGCTATCTTTGCCTTTCCAGGACAAGAGCCGTGAGAAGCTGATTCGGTACTTCGAGCTCTTAGCCCTCC CCACTTTGGTTATTATTGGGCCAGATGGGAAAACTCTTCATTCTAATGTTGCTGAGGCTATTGAGGAACATGGGATTGCTGCATACCCTTTCACTCCTGA AAAGTTTGCTGAACTCGTCGAGTTAGAGAAGGCCAAGGAGGCATCTCAAACTCTTGAGTCAATTTTGGTGTCCGGAGACCTAGATTTTGTCATTGGGAAA GATGGGGTGAAGATTCCGGTTTCCGAATTGGTGGGGAAGAACATCCTCCTCTACTTCTCGGCTCACTGGTGTCCTCCATGCCGTGCATTCCTTCCAAAAC TCACTGAAGTATATCATAAGATTAAGGCAAAGGACAGTGCATTTGAACTCATTTTCATCTCAAGTGACAATGATCAAGAGTCCTTTGATGGATACTATGC AGAAATGCCATGGTTGGCACTTCCATTCGGTGACTCAAGGAAGGCATTCCTGAGTCGCAAATTCAAGGTGACTAGCATTCCTTGGCTCGTGGCCATTGGA TCAAATGGCATTACTGTCACGAAAGAAGCTCGAGGTCTGGTTGCGCTTCATGGGGCAGATGCTTATCCTTTCACCGATGAGAGAATAAAAGAAATAGAGG CAGAATATGAAGATGCTGCAAAGGGGTGGCCTGAGAAGGTGACGCATGAAGCACATGAGCACGAGCTTTTGTTGACTCTCCGTCCGAACTATTGTTGTGA TGGTTGTGATATTGAGGGGGATATACGGTCATACTACTGTGATGAGTGTGACTTTGATCTCCATCCAAAATGTGCACTGGAAGAGAAGGGAAACAAAGAT GATGCTAAGGAAGATGAGAAGTCCAAAGATGGATGGGTTTGTGATGGTGATGTCTGTGTTAAAGCCTGAAATCTGATGGTTATATATTGATAATTGATGT TATTAAGCATATTATCTGCATGTGATGCCAGTCATAGCCTTTTCTACTATGTCTTGTATGATGTGAACTATGTAGAAATATTGGATGTGTGATTTGATAT GAGTGGTGAACTTTGAATATTTGATGTTTGATATTACTGGTGATCTTGAATTTATGGTGAACATGGGTTACCAGGTCAAAAGATGATGATAAGTGACATG AATAAATCATTTATGCTTCGGATTTTAAATTATTTTTTAATAAAACAATTTTAATAGTTAACAAAATCTCTTCTTTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_154305; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_360618
| Blastp | Probable nucleoredoxin 1 from Arabidopsis with 65.1% of identity |
|---|---|
| Blastx | Probable nucleoredoxin 1 from Arabidopsis with 57.82% of identity |
| Eggnog | nucleoredoxin-like(ENOG410ZIWC) |
| Kegg | Link to kegg annotations (AT1G60420) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019423440.1) |
| Pfam | Thioredoxin-like (PF13905.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |