Id Trinity | TRINITY_DN47659_c5_g1_i12 |
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Name Transcript | Ll_transcript_359433 |
Sequence | CAAAAGACTTACTCCTTATCTTATATTATGAATTTAATTTCAGACAAATCAATTGTTTGAATTAATGGTAAATCTAAACCATTAAATTGATTTCCAATAA ACTGATAATATAAGATGAGGAGTTCCTGAACGAGATTAACTTGATCCTCCATCCTCCTTGTAATTATATGAAATAGTTGTTGAAATCTTTGTTCCAAAAC CCAAACCCCGAACCGAAGTTGAAATCATTCGTGAATGCTTCAATTCCATGATGGAGTTCAGAGCTCGCGATTACACTCTCCACCTTCGTTCTCACGCGCT CCCTCGCGTACCCGCTCATTCTCACCCTCTCTCCTCTCCTTCTTCTCTTTCCCTTTCCCTTTCACAGGTCAATGTTGTGCATCACGAGAACAATGAATTC TTCGATCCACTAAGAAGAAATGAACATGATATGAAAACCACAACGAGTAAAGATTCTGATCATCAGCCAGCGAAGGAGTGGACCTCGTTCAGGAGATTAC TAATGCAGAGATTTCCTGTCTCCAAAATGGTTTCTATTTCTTCTATGCCCGATGTTTTATTGAGAAGTGGAAAATCACAAGAGAAATCTTCAATAAGCAT GCACTTGGAGGAACTGGATGATTCACAAAAAATTGAAGACGGGGGTGCCAAGGTGATCACGTGGCAGGAGTATGTTTCTCGACTACATGAGCTCAAAGAT GAAATTAATCGTTCTTGGCTTGCTGAAGATCGTGTAACATCCTTGAGGTTATCCATAAAGGTTGCTAAGCTTCTGATGGATACGTCAGTTTCTGAGTTTT ATCCTACACTTTTTGTCCTTGTCACAGATATCATGGACATGCTCGGGGATCTGGTTTGGCAACGCATAAGGAGGAAAGCTGAGTTTTCTGAGGAGGGAAC TTTACTGTGCAACTTACCAGAAAACTTTGGAGCAATTGATATTTGTGCTGATGCGAAAGAAACTTGCAATAACTGGTTCATCAAAATTGGTTCTGTACAA GAGCTTCTTCCACGCATTTACTTGGAACTGGCAATATTGCCTTGCTGGCGCTTTCTGCTTGATCAACCTGCAGACAGTCTCCGGCGTTTGGTAATGATGA CAAGAGGATTAGGAGATCCAGTGGCTTCTGCATATTGCCGTCTATACATGGCTCACTGTGCTCAGAAGCTGCCTGCACATGATATTGGTTACCTTGTTAC TTGTGTTAATGACATCACATATATATTGATGCAAATGTTGTCAGCAAAAGAAAGCACTCATGGAAATGTTCAAAGCTTCAAAAAATTACAAGTTAGTCAG ATGGAACCAACCATTCAGTATATTATGAAGTGTATATTTAATGGGTTGTCTCAGAGACAAGTCAGTGAAGTTCTCGTGGAGCTTGGATTTATGAAGAGTC AACAGGATTTTCCGAGGGTCTCAGTTGTTCTTCATCATTTACTGAAGGAACTCCCTATCGAAGTTGTTTGTTCAAATGCTCTGCAGATCCTTCATCTCAT TGAATTTAGCAAGGATAGTTCCTTTGATCAGCACATGAATTACAGATTGGTTGGATTCAGGCTGTATGAGATGAAACCTCCAGTTGACGTTCTCAATGCT GTATTAGATAAAGTCATTCAGGTTATTACTCAGTATGAGAGCCTTGATGAGTACTTGAAGGTTGTAGATGCTTATGCTGATCTTATTCTTCAGAATCAGA TGGATAACATTTTGAACACCATTTTGGAAGGCATTTCACAGCGTGCTAGGAATAAAGGAGTTACAGAAGATGAAATGCCAAGCTTGCAATCTCTCTTGGT GAAGCTTCTGTCTCATTTTAAGTGTCTGGAAGATGTGTTTTGTCTGAATTGCTTTCCTGAAATCTTAGATATGATGCGTGGGAATTCACGCGATGTTGTC TTTTTGCACATCCTTAATATGGCAACAAGGAAAGGTAACATCAGTGACGCGACGAGCATACAATTGCTTTTTGAAATTTCTCAAACTCTACATGACAATT TGGAATTCATGAATGTGAAAGATGATGATAGACTAGTGGCACGTTCAATCACTCGCTTTGTGCACATGGTAGATTATGGAGCAGAGATGGAACGCCATTT AGCATTTTTGGTTGATTGCAGAGGAGCTTTTGGTAAATTAAATGAGCTTAAGGAAGCTCTTGTTCATTCTAGCAACTATTTAGCAATTCAAGCTTTGAAA TGTCCTAAGAAACTTCCAAGTTGTTTTTTTAAATCCTGCATCACATTTAGCGAAGTCACAATACCTTCCGTTACTGCTCAGGGTAGGCAATTTGATCTAT ATCTAGAGACTACAGAGGTTGCACTCTTAGGGGGCTTGATTTCTCATTCAGATGGATTGATTGATTCAGCAATTGGCTATTTGTGTACCGTTAACATATT GGATGCCTTTCGGATGCCGAGTGATGTTGAAGGACTAGTTTCATCAATTAGAAAGCTTTGTGGCATCTTAGTTCTGGTTCCAGGTAATTTTACTCTACCT GCCACCGATGTCCCAAACAACTTATTTACATTGATCAGCTCCCAATCATGTTATGAACCAAAAATGAGGACAAAGATTTTTTCTGCAATCATATTACTAT TGACAACTTTATCACAGGAGACTTTTCCATATCATGCAAATATACAGGTATGGCTTTACCTTTCCTTAATGTATTCTGCGATTGAAAGTAATTGTTAATG TAAGTTTAATGGAATAAAAATGACATACCATTGGTCCTAGTCCTACAATCTAAAATGGACAAAATGGAACATCAAAGTTTTTTAAAGAGTATTTAGGAAA GTCTCATGAGTCATAATGGGTATAAGTATCATTTGGTGTCCATATCTCCAAAATTTAGTCTAGGATTAGCACTTACGTGCTACAACTATTTTGAGCCACT TTAGTGAATCTATATTACTTTCATCTCACTTTTCTCTTTCAAAATATCCATGCTTCTCTTAATCCTATGACTCATATTAACAAAGTTCAGTAATGCCTTG TCATGCACTGATCTTCCCTAGTGACTAACCAATAATGAACCTAACGTTACCTGCTAAGGCCTTTTTCCACCTCTAGGCGCGCTCTGTACAGAGCTTTTCG AAGGTGAGACTATGTTACCATTATCCTCTACATTGGGTCATCTTTGAAATGAATATCACCAATTGTCTGGGGAAGCCATAATCCCTCTTTCAATTATAAT GCCATGCACTATCTTAGTTATGATAAGCAGTTTCTAGCCATGACGCTGCTTGAGTTTTACCTTTTTTTCATACTTACACTGGCTATAATAAGTGCAATGG TTTATGATTTTGTAAATCGCAGTCTTCCTGATCAGTCTACTAACTTTTATTGTATATCTTAATTCCCAAAGCGATGTATTTTTTCCTTTCCAGATTCCCA GAAATGACACGTTATATTATGGGGATTTATCTTATAAGCAAGAACTTGTTTCTCTGTCTAAACTTGTTCTTGAGAACCTGATTAGTGCAGTTCAAGAAGA AAGTTCCAAGGCTGTTCGAGGAATTATTGCACTTGAAGCTTGCAATTGCATTGCATCATCTTTCAGGGCAAGCGAGGAATTATTGAGTGTTTGCCAGATG CTAATTGAGACGGCCAAGTCATGTTTGAGTCCCACAGATAAATACCTCCACTCTACCATTCTATTTCTAACCAACCAATCCACCACTTCTCTATAATTTG TGTTCTATATGCTCATAGCATAGCTTTTTATACATGTATATTGTAACATTATCATCATTAGTAATACTTATCCTCCTTTTTTGGGGGGAAAGAGATTCTT TATTTAATTTCATTTAATTTTGTTTTTGTGCATTTTGAAGAGATAAAAAATGTCGATACATGTTGATTTAACGATCATTATCAAACAAGTAGTGAAATTT TGATCTGAACTTGTTCATAGTAGTTATAATATAAAAATGTGAACAAAGAGAACTATACTAATCATCCCTCTAGATGTTAATCGAGAATTGATGGACTTGT TTGGATCTAGCCATTGAG BLAST |
Tissue | pods |
Gene name | LI_gene_154457; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_359433
Blastp | UPF0505 protein C16orf62 homolog from Mus with 27.97% of identity |
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Blastx | UPF0505 protein C16orf62 homolog from Mus with 27.97% of identity |
Eggnog | Chromosome 16 open reading frame 62(ENOG410XQR5) |
Kegg | Link to kegg annotations (71517) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019456613.1) |
Pfam | Vacuolar protein sorting-associated protein 35 (PF03635.16) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |