Ll_transcript_359423

• Id Trinity: TRINITY_DN47659_c5_g1_i2
• Name Transcript: Ll_transcript_359423
• Sequence: CAAAAGACTTACTCCTTATCTTATATTATGAATTTAATTTCAGACAAATCAATTGTTTGAATTAATGGTAAATCTAAACCATTAAATTGATTTCCAATAA ACTGATAATATAAGATGAGGAGTTCCTGAACGAGATTAACTTGATCCTCCATCCTCCTTGTAATTATATGAAATAGTTGTTGAAATCTTTGTTCCAAAAC CCAAACCCCGAACCGAAGTTGAAATCATTCGTGAATGCTTCAATTCCATGATGGAGTTCAGAGCTCGCGATTACACTCTCCACCTTCGTTCTCACGCGCT CCCTCGCGTACCCGCTCATTCTCACCCTCTCTCCTCTCCTTCTTCTCTTTCCCTTTCCCTTTCACAGGTCAATGTTGTGCATCACGAGAACAATGAATTC TTCGATCCACTAAGAAGAAATGAACATGATATGAAAACCACAACGAGTAAAGATTCTGATCATCAGCCAGCGAAGGAGTGGACCTCGTTCAGGAGATTAC TAATGCAGAGATTTCCTGTCTCCAAAATGGTTTCTATTTCTTCTATGCCCGATGTTTTATTGAGAAGTGGAAAATCACAAGAGAAATCTTCAATAAGCAT GCACTTGGAGGAACTGGATGATTCACAAAAAATTGAAGACGGGGGTGCCAAGGTGATCACGTGGCAGGAGTATGTTTCTCGACTACATGAGCTCAAAGAT GAAATTAATCGTTCTTGGCTTGCTGAAGATCGTGTAACATCCTTGAGGTTATCCATAAAGGTTGCTAAGCTTCTGATGGATACGTCAGTTTCTGAGTTTT ATCCTACACTTTTTGTCCTTGTCACAGATATCATGGACATGCTCGGGGATCTGGTTTGGCAACGCATAAGGAGGAAAGCTGAGTTTTCTGAGGAGGGAAC TTTACTGTGCAACTTACCAGAAAACTTTGGAGCAATTGATATTTGTGCTGATGCGAAAGAAACTTGCAATAACTGGTTCATCAAAATTGGTTCTGTACAA GAGCTTCTTCCACGCATTTACTTGGAACTGGCAATATTGCCTTGCTGGCGCTTTCTGCTTGATCAACCTGCAGACAGTCTCCGGCGTTTGGTAATGATGA CAAGAGGATTAGGAGATCCAGTGGCTTCTGCATATTGCCGTCTATACATGGCTCACTGTGCTCAGAAGCTGCCTGCACATGATATTGGTTACCTTGTTAC TTGTGTTAATGACATCACATATATATTGATGCAAATGTTGTCAGCAAAAGAAAGCACTCATGGAAATGTTCAAAGCTTCAAAAAATTACAAGTTAGTCAG ATGGAACCAACCATTCAGTATATTATGAAGTGTATATTTAATGGGTTGTCTCAGAGACAAGTCAGTGAAGTTCTCGTGGAGCTTGGATTTATGAAGAGTC AACAGGATTTTCCGAGGGTCTCAGTTGTTCTTCATCATTTACTGAAGGAACTCCCTATCGAAGTTGTTTGTTCAAATGCTCTGCAGATCCTTCATCTCAT TGAATTTAGCAAGGATAGTTCCTTTGATCAGATTGGTTGGATTCAGGCTGTATGAGATGAAACCTCCAGTTGACGTTCTCAATGCTGTATTAGATAAAGT CATTCAGGTTATTACTCAGTATGAGAGCCTTGATGAGTACTTGAAGGTTGTAGATGCTTATGCTGATCTTATTCTTCAGAATCAGATGGATAACATTTTG AACACCATTTTGGAAGGCATTTCACAGCGTGCTAGGAATAAAGGAGTTACAGAAGATGAAATGCCAAGCTTGCAATCTCTCTTGGTGAAGCTTCTGTCTC ATTTTAAGTGTCTGGAAGATGTGTTTTGTCTGAATTGCTTTCCTGAAATCTTAGATATGATGCGTGGGAATTCACGCGATGTTGTCTTTTTGCACATCCT TAATATGGCAACAAGGAAAGGTAACATCAGTGACGCGACGAGCATACAATTGCTTTTTGAAATTTCTCAAACTCTACATGACAATTTGGAATTCATGAAT GTGAAAGATGATGATAGACTAGTGGCACGTTCAATCACTCGCTTTGTGCACATGGTAGATTATGGAGCAGAGATGGAACGCCATTTAGCATTTTTGGTTG ATTGCAGAGGAGCTTTTGGTAAATTAAATGAGCTTAAGGAAGCTCTTGTTCATTCTAGCAACTATTTAGCAATTCAAGCTTTGAAATGTCCTAAGAAACT TCCAAGTTGTTTTTTTAAATCCTGCATCACATTTAGCGAAGTCACAATACCTTCCGTTACTGCTCAGGGTAGGCAATTTGATCTATATCTAGAGACTACA GAGGTTGCACTCTTAGGGGGCTTGATTTCTCATTCAGATGGATTGATTGATTCAGCAATTGGCTATTTGTGTACCGTTAACATATTGGATGCCTTTCGGA TGCCGAGTGATGTTGAAGGACTAGTTTCATCAATTAGAAAGCTTTGTGGCATCTTAGTTCTGGTTCCAGGTAATTTTACTCTACCTGCCACCGATGTCCC AAACAACTTATTTACATTGATCAGCTCCCAATCATGTTATGAACCAAAAATGAGGACAAAGATTTTTTCTGCAATCATATTACTATTGACAACTTTATCA CAGGAGACTTTTCCATATCATGCAAATATACAGGTATGGCTTTACCTTTCCTTAATGTATTCTGCGATTGAAAGTAATTGTTAATGTAAGTTTAATGGAA TAAAAATGACATACCATTGGTCCTAGTCCTACAATCTAAAATGGACAAAATGGAACATCAAAGTTTTTTAAAGAGTATTTAGGAAAGTCTCATGAGTCAT AATGGGTATAAGTATCATTTGGTGTCCATATCTCCAAAATTTAGTCTAGGATTAGCACTTACGTGCTACAACTATTTTGAGCCACTTTAGTGAATCTATA TTACTTTCATCTCACTTTTCTCTTTCAAAATATCCATGCTTCTCTTAATCCTATGACTCATATTAACAAAGTTCAGTAATGCCTTGTCATGCACTGATCT TCCCTAGTGACTAACCAATAATGAACCTAACGTTACCTGCTAAGGCCTTTTTCCACCTCTAGGCGCGCTCTGTACAGAGCTTTTCGAAGGTGAGACTATG TTACCATTATCCTCTACATTGGGTCATCTTTGAAATGAATATCACCAATTGTCTGGGGAAGCCATAATCCCTCTTTCAATTATAATGCCATGCACTATCT TAGTTATGATAAGCAGTTTCTAGCCATGACGCTGCTTGAGTTTTACCTTTTTTTCATACTTACACTGGCTATAATAAGTGCAATGGTTTATGATTTTGTA AATCGCAGTCTTCCTGATCAGTCTACTAACTTTTATTGTATATCTTAATTCCCAAAGCGATGTATTTTTTCCTTTCCAGATTCCCAGAAATGACACGTT
• Tissue: pods
• Gene name: LI_gene_154457;
• Additional information: details;

Expression of Ll_transcript_359423

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0.1
• PS2: 0.3
• PS3: 0.2
• PW1: 0.1
• PW2: 0
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_359423

• Blastp: UPF0505 protein C16orf62 homolog from Danio with 30.61% of identity
• Blastx: UPF0505 protein C16orf62 homolog from Mus with 30.29% of identity
• Eggnog: Chromosome 16 open reading frame 62(ENOG410XQR5)
• Kegg: Link to kegg annotations (563454)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019456613.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;