Id Trinity | TRINITY_DN47659_c5_g1_i6 |
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Name Transcript | Ll_transcript_359427 |
Sequence | CAAAAGACTTACTCCTTATCTTATATTATGAATTTAATTTCAGACAAATCAATTGTTTGAATTAATGGTAAATCTAAACCATTAAATTGATTTCCAATAA ACTGATAATATAAGATGAGGAGTTCCTGAACGAGATTAACTTGATCCTCCATCCTCCTTGTAATTATATGAAATAGTTGTTGAAATCTTTGTTCCAAAAC CCAAACCCCGAACCGAAGTTGAAATCATTCGTGAATGCTTCAATTCCATGATGGAGTTCAGAGCTCGCGATTACACTCTCCACCTTCGTTCTCACGCGCT CCCTCGCGTACCCGCTCATTCTCACCCTCTCTCCTCTCCTTCTTCTCTTTCCCTTTCCCTTTCACAGGTCAATGTTGTGCATCACGAGAACAATGAATTC TTCGATCCACTAAGAAGAAATGAACATGATATGAAAACCACAACGAGTAAAGATTCTGATCATCAGCCAGCGAAGGAGTGGACCTCGTTCAGGAGATTAC TAATGCAGAGATTTCCTGTCTCCAAAATGGTTTCTATTTCTTCTCACAAGAGAAATCTTCAATAAGCATGCACTTGGAGGAACTGGATGATTCACAAAAA ATTGAAGACGGGGGTGCCAAGGTGATCACGTGGCAGGAGTATGTTTCTCGACTACATGAGCTCAAAGATGAAATTAATCGTTCTTGGCTTGCTGAAGATC GTGTAACATCCTTGAGGTTATCCATAAAGGTTGCTAAGCTTCTGATGGATACGTCAGTTTCTGAGTTTTATCCTACACTTTTTGTCCTTGTCACAGATAT CATGGACATGCTCGGGGATCTGGTTTGGCAACGCATAAGGAGGAAAGCTGAGTTTTCTGAGGAGGGAACTTTACTGTGCAACTTACCAGAAAACTTTGGA GCAATTGATATTTGTGCTGATGCGAAAGAAACTTGCAATAACTGGTTCATCAAAATTGGTTCTGTACAAGAGCTTCTTCCACGCATTTACTTGGAACTGG CAATATTGCCTTGCTGGCGCTTTCTGCTTGATCAACCTGCAGACAGTCTCCGGCGTTTGGTAATGATGACAAGAGGATTAGGAGATCCAGTGGCTTCTGC ATATTGCCGTCTATACATGGCTCACTGTGCTCAGAAGCTGCCTGCACATGATATTGGTTACCTTGTTACTTGTGTTAATGACATCACATATATATTGATG CAAATGTTGTCAGCAAAAGAAAGCACTCATGGAAATGTTCAAAGCTTCAAAAAATTACAAGTTAGTCAGATGGAACCAACCATTCAGTATATTATGAAGT GTATATTTAATGGGTTGTCTCAGAGACAAGTCAGTGAAGTTCTCGTGGAGCTTGGATTTATGAAGAGTCAACAGGATTTTCCGAGGGTCTCAGTTGTTCT TCATCATTTACTGAAGGAACTCCCTATCGAAGTTGTTTGTTCAAATGCTCTGCAGATCCTTCATCTCATTGAATTTAGCAAGGATAGTTCCTTTGATCAG CACATGAATTACAGATTGGTTGGATTCAGGCTGTATGAGATGAAACCTCCAGTTGACGTTCTCAATGCTGTATTAGATAAAGTCATTCAGGTTATTACTC AGTATGAGAGCCTTGATGAGTACTTGAAGGTTGTAGATGCTTATGCTGATCTTATTCTTCAGAATCAGATGGATAACATTTTGAACACCATTTTGGAAGG CATTTCACAGCGTGCTAGGAATAAAGGAGTTACAGAAGATGAAATGCCAAGCTTGCAATCTCTCTTGGTGAAGCTTCTGTCTCATTTTAAGTGTCTGGAA GATGTGTTTTGTCTGAATTGCTTTCCTGAAATCTTAGATATGATGCGTGGGAATTCACGCGATGTTGTCTTTTTGCACATCCTTAATATGGCAACAAGGA AAGGTAACATCAGTGACGCGACGAGCATACAATTGCTTTTTGAAATTTCTCAAACTCTACATGACAATTTGGAATTCATGAATGTGAAAGATGATGATAG ACTAGTGGCACGTTCAATCACTCGCTTTGTGCACATGGTAGATTATGGAGCAGAGATGGAACGCCATTTAGCATTTTTGGTTGATTGCAGAGGAGCTTTT GGTAAATTAAATGAGCTTAAGGAAGCTCTTGTTCATTCTAGCAACTATTTAGCAATTCAAGCTTTGAAATGTCCTAAGAAACTTCCAAGTTGTTTTTTTA AATCCTGCATCACATTTAGCGAAGTCACAATACCTTCCGTTACTGCTCAGGGTAGGCAATTTGATCTATATCTAGAGACTACAGAGGTTGCACTCTTAGG GGGCTTGATTTCTCATTCAGATGGATTGATTGATTCAGCAATTGGCTATTTGTGTACCGTTAACATATTGGATGCCTTTCGGATGCCGAGTGATGTTGAA GGACTAGTTTCATCAATTAGAAAGCTTTGTGGCATCTTAGTTCTGGTTCCAGGTAATTTTACTCTACCTGCCACCGATGTCCCAAACAACTTATTTACAT TGATCAGCTCCCAATCATGTTATGAACCAAAAATGAGGACAAAGATTTTTTCTGCAATCATATTACTATTGACAACTTTATCACAGGAGACTTTTCCATA TCATGCAAATATACAGATTCCCAGAAATGACACGTTATATTATGGGGATTTATCTTATAAGCAAGAACTTGTTTCTCTGTCTAAACTTGTTCTTGAGAAC CTGATTAGTGCAGTTCAAGAAGAAAGTTCCAAGGCTGTTCGAGGAATTATTGCA BLAST |
Tissue | pods |
Gene name | LI_gene_154457; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_359427
Blastp | UPF0505 protein C16orf62 homolog from Mus with 28.8% of identity |
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Blastx | UPF0505 protein C16orf62 homolog from Mus with 28.74% of identity |
Eggnog | Chromosome 16 open reading frame 62(ENOG410XQR5) |
Kegg | Link to kegg annotations (71517) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019456615.1) |
Pfam | Vacuolar protein sorting-associated protein 35 (PF03635.16) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |