Ll_transcript_359429

• Id Trinity: TRINITY_DN47659_c5_g1_i8
• Name Transcript: Ll_transcript_359429
• Sequence: CAAAAGACTTACTCCTTATCTTATATTATGAATTTAATTTCAGACAAATCAATTGTTTGAATTAATGGTAAATCTAAACCATTAAATTGATTTCCAATAA ACTGATAATATAAGATGAGGAGTTCCTGAACGAGATTAACTTGATCCTCCATCCTCCTTGTAATTATATGAAATAGTTGTTGAAATCTTTGTTCCAAAAC CCAAACCCCGAACCGAAGTTGAAATCATTCGTGAATGCTTCAATTCCATGATGGAGTTCAGAGCTCGCGATTACACTCTCCACCTTCGTTCTCACGCGCT CCCTCGCGTACCCGCTCATTCTCACCCTCTCTCCTCTCCTTCTTCTCTTTCCCTTTCCCTTTCACAGGTCAATGTTGTGCATCACGAGAACAATGAATTC TTCGATCCACTAAGAAGAAATGAACATGATATGAAAACCACAACGAGTAAAGATTCTGATCATCAGCCAGCGAAGGAGTGGACCTCGTTCAGGAGATTAC TAATGCAGAGATTTCCTGTCTCCAAAATGGTTTCTATTTCTTCTCACAAGAGAAATCTTCAATAAGCATGCACTTGGAGGAACTGGATGATTCACAAAAA ATTGAAGACGGGGGTGCCAAGGTGATCACGTGGCAGGAGTATGTTTCTCGACTACATGAGCTCAAAGATGAAATTAATCGTTCTTGGCTTGCTGAAGATC GTGTAACATCCTTGAGGTTATCCATAAAGGTTGCTAAGCTTCTGATGGATACGTCAGTTTCTGAGTTTTATCCTACACTTTTTGTCCTTGTCACAGATAT CATGGACATGCTCGGGGATCTGGTTTGGCAACGCATAAGGAGGAAAGCTGAGTTTTCTGAGGAGGGAACTTTACTGTGCAACTTACCAGAAAACTTTGGA GCAATTGATATTTGTGCTGATGCGAAAGAAACTTGCAATAACTGGTTCATCAAAATTGGTTCTGTACAAGAGCTTCTTCCACGCATTTACTTGGAACTGG CAATATTGCCTTGCTGGCGCTTTCTGCTTGATCAACCTGCAGACAGTCTCCGGCGTTTGGTAATGATGACAAGAGGATTAGGAGATCCAGTGGCTTCTGC ATATTGCCGTCTATACATGGCTCACTGTGCTCAGAAGCTGCCTGCACATGATATTGGTTACCTTGTTACTTGTGTTAATGACATCACATATATATTGATG CAAATGTTGTCAGCAAAAGAAAGCACTCATGGAAATGTTCAAAGCTTCAAAAAATTACAAGTTAGTCAGATGGAACCAACCATTCAGTATATTATGAAGT GTATATTTAATGGGTTGTCTCAGAGACAAGTCAGTGAAGTTCTCGTGGAGCTTGGATTTATGAAGAGTCAACAGGATTTTCCGAGGGTCTCAGTTGTTCT TCATCATTTACTGAAGGAACTCCCTATCGAAGTTGTTTGTTCAAATGCTCTGCAGATCCTTCATCTCATTGAATTTAGCAAGGATAGTTCCTTTGATCAG CACATGAATTACAGATTGGTTGGATTCAGGCTGTATGAGATGAAACCTCCAGTTGACGTTCTCAATGCTGTATTAGATAAAGTCATTCAGGTTATTACTC AGTATGAGAGCCTTGATGAGTACTTGAAGGTTGTAGATGCTTATGCTGATCTTATTCTTCAGAATCAGATGGATAACATTTTGAACACCATTTTGGAAGG CATTTCACAGCGTGCTAGGAATAAAGGAGTTACAGAAGATGAAATGCCAAGCTTGCAATCTCTCTTGGTGAAGCTTCTGTCTCATTTTAAGTGTCTGGAA GATGTGTTTTGTCTGAATTGCTTTCCTGAAATCTTAGATATGATGCGTGGGAATTCACGCGATGTTGTCTTTTTGCACATCCTTAATATGGCAACAAGGA AAGGTAACATCAGTGACGCGACGAGCATACAATTGCTTTTTGAAATTTCTCAAACTCTACATGACAATTTGGAATTCATGAATGTGAAAGATGATGATAG ACTAGTGGCACGTTCAATCACTCGCTTTGTGCACATGGTAGATTATGGAGCAGAGATGGAACGCCATTTAGCATTTTTGGTTGATTGCAGAGGAGCTTTT GGTAAATTAAATGAGCTTAAGGAAGCTCTTGTTCATTCTAGCAACTATTTAGCAATTCAAGCTTTGAAATGTCCTAAGAAACTTCCAAGTTGTTTTTTTA AATCCTGCATCACATTTAGCGAAGTCACAATACCTTCCGTTACTGCTCAGGGTAGGCAATTTGATCTATATCTAGAGACTACAGAGGTTGCACTCTTAGG GGGCTTGATTTCTCATTCAGATGGATTGATTGATTCAGCAATTGGCTATTTGTGTACCGTTAACATATTGGATGCCTTTCGGATGCCGAGTGATGTTGAA GGACTAGTTTCATCAATTAGAAAGCTTTGTGGCATCTTAGTTCTGGTTCCAGGTAATTTTACTCTACCTGCCACCGATGTCCCAAACAACTTATTTACAT TGATCAGCTCCCAATCATGTTATGAACCAAAAATGAGGACAAAGATTTTTTCTGCAATCATATTACTATTGACAACTTTATCACAGGAGACTTTTCCATA TCATGCAAATATACAGGTATGGCTTTACCTTTCCTTAATGTATTCTGCGATTGAAAGTAATTGTTAATGTAAGTTTAATGGAATAAAAATGACATACCAT TGGTCCTAGTCCTACAATCTAAAATGGACAAAATGGAACATCAAAGTTTTTTAAAGAGTATTTAGGAAAGTCTCATGAGTCATAATGGGTATAAGTATCA TTTGGTGTCCATATCTCCAAAATTTAGTCTAGGATTAGCACTTACGTGCTACAACTATTTTGAGCCACTTTAGTGAATCTATATTACTTTCATCTCACTT TTCTCTTTCAAAATATCCATGCTTCTCTTAATCCTATGACTCATATTAACAAAGTTCAGTAATGCCTTGTCATGCACTGATCTTCCCTAGTGACTAACCA ATAATGAACCTAACGTTACCTGCTAAGGCCTTTTTCCACCTCTAGGCGCGCTCTGTACAGAGCTTTTCGAAGGTGAGACTATGTTACCATTATCCTCTAC ATTGGGTCATCTTTGAAATGAATATCACCAATTGTCTGGGGAAGCCATAATCCCTCTTTCAATTATAATGCCATGCACTATCTTAGTTATGATAAGCAGT TTCTAGCCATGACGCTGCTTGAGTTTTACCTTTTTTTCATACTTACACTGGCTATAATAAGTGCAATGGTTTATGATTTTGTAAATCGCAGTCTTCCTGA TCAGTCTACTAACTTTTATTGTATATCTTAATTCCCAAAGCGATGTATTTTTTCCTTTCCAGATTCCCAGAAATGACACGTTATATTATGGGGATTTATC TTATAAGCAAGAACTTGTTTCTCTGTCTAAACTTGTTCTTGAGAACCTGATTAGTGCAGTTCAAGAAGAAAGTTCCAAGGCTGTTCGAGGAATTATTGCA CTTGAAGCTTGCAATTGCATTGCATCATCTTTCAGGGCAAGCGAGGAATTATTGAGTGTTTGCCAGATGCTAATTGAGACGGCCAAGTCATGTTTGAGTC CCACAGATAAATACCTCCACTCTACCATTCTATTTCTAACCAACCAATCCACCACTTCTCTATAATTTGTGTTCTATATGCTCATAGCATAGCTTTTTAT ACATGTATATTGTAACATTATCATCATTAGTAATACTTATCCTCCTTTTTTGGGGGGAAAGAGATTCTTTATTTAATTTCATTTAATTTTGTTTTTGTGC ATTTTGAAGAGATAAAAAATGTCGATACATGTTGATTTAACGATCATTATCAAACAAGTAGTGAAATTTTGATCTGAACTTGTTCATAGTAGTTATAATA TAAAAATGTGAACAAAGAGAACTATACTAATCATCCCTCTAGATGTTAATCGAGAATTGATGGACTTGTTTGGATCTAGCCATTGAG
• Tissue: pods
• Gene name: LI_gene_154457;
• Additional information: details;

Expression of Ll_transcript_359429

FPKM

• PAB: 0.1
• PNAB: 0.9
• PS1: 0.1
• PS2: 0.3
• PS3: 0.2
• PW1: 0.6
• PW2: 0.9
• PW3: 1.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_359429

• Blastp: UPF0505 protein C16orf62 homolog from Mus with 28.74% of identity
• Blastx: UPF0505 protein C16orf62 homolog from Mus with 28.57% of identity
• Eggnog: Chromosome 16 open reading frame 62(ENOG410XQR5)
• Kegg: Link to kegg annotations (71517)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019456615.1)
• Pfam: Vacuolar protein sorting-associated protein 35 (PF03635.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;