Ll_transcript_374383

• Id Trinity: TRINITY_DN47709_c2_g1_i1
• Name Transcript: Ll_transcript_374383
• Sequence: CTAAAACAATGATACATCTGTATCTCATCCTAAACTTGCAATGGTCAATCTCGACATGCTCCCAGCTTCTTCATCTTCTGTATCTTGTCCTAAACAATAT GATGTTTTTCTTAGCTTTCATGGACAGGATACTCGTAATAACTTCACAACACATCTTTATGGCTATCTTCAACAAAACAATGTTAAAACCTTTATAGACT ATGACCTTGAAAGAGGACATGAGATCTCACCAGCAATCATGAAAGCTATTGATGAATCACATGTATCTATAATCATCTTCTCTCTAAACTATGCTTCCTC TAAATGGTGCTTAGATGAACTTACCAAAATTATGGACTGCCATAAATCTACGGAACAAGATGTGATACCTGTGTTCTATAATGTAGACCCTGCACATGTG AGGAAACAGGTTGGGAGTTACAAGAATGCTTTTACAAAACATGAGAAAGATATGAGACACAACATGGAGAAGGTGCAGAAATGGAGAGTAGCTCTCACTC AAGCATCCAATTTAGCTGGCTTCACATGGGACTCAAAAAGAGATAGGAACGAATTTGAATTCATTAAGGATATTGTTGGAGATGTTATGAAGAAGCTCAA TCTTAGATACCCAATTGAATTGAAGGGATTGGTTGGAATTGAGGAAAATTATGCAGAGATTGAATCATTAATGAAAATTAGACCGAGTGAGGTAGGAATC ATTGGAATATGGGGCATGGGAGGCATAGGTAAGACAACCCTTGCCACTGCTTTATATGCAAAATTGTCTTCTTCATTTCAAAGTTCTTGCTTCCTTCAAA ATGTAAGGGAAGAATTACAAAAAATGGGGCGCGATGCTTTACGCGAGAAACTTTTTTCTAAGCTATTAAAGGAGAAAAATCTTAGTGGAAATTTTGATTC CACCACACTGAGGCATAGAAAAGTTTTGATAGTGTTGGATGATGTGGCTACTCCGTTGCAATTAGATGGAATCATAGATTGCGATTGCTTCGGGTCAGGA AGTAGAATAGTTGTGACAACTAGAAATAAGCATGTGTTTAGGGATGATCATCAAATATATGAGGTCAAGGAATTAAATCATGATCATTCTCTTAAGATTT TTTGTGTAAATGCCTTTAGCTTAGAGCATCCTAAAGATGGATATGAAGAGCTAGTGCAAGTTGTGGTTGATTATTGCAAAGGCCTTCCTTCGGCTTTAAA AGTTTTGGGTCTATATTTTCATGGAAAAAGTAAAGGAGTATGGGAAAGTGATATAAAAAAGCTCAAAAAGTATCCGGATATGGATATCCATAAGGTTTTG AGATTGAGTTATGACAGTCTGGATGAGACCCAAAAGTCTATATTTCTAGATATTGCATGTTTTTTTAAAGGCAAATCCAGAGATCATGTAACAAGGTTTT TTGAAGCTTGTGAATTTTTTCCTGACAGTGGGATACAGGCCCTTTTGGACATGGCACTCATAACTATCTCCTCTGGTAATACAATAGAAATGCATGACTT GATACAAGAAATGGGTTGGGAAATTGTTCGTCAAGAATCCATTAAACATCCTGAAAGACGAAGCCGATTGTGGAATACTAAGGAAGTATATGATGTATTG AAAAATAACAGGGGAACTGAAAATATGGAAGGAATAATGTTCGATATGTCTCAACTTCAAAAGGATCTATGTTTGAGCTCCGATTTGTTTGCAAAGATGC CCAAGTTAAGATATGTTGAATTCTGTGATAGGCATAATAATAATAGTAGTAGTAGTAATTATATCTACCTTCCCAATGGTCTTGAGTGGTTTCCTGATGA ATTGAGGCACCTTTGTTGGCCTACATATTGTGCTAAGTCATTGCCATCAACTTTTTGCGCTGAAATGCTTGTAGAGCTTCGCATGTCAAACAGCAAACTC GAAAAGCTTTGGGATGGTGTACAGAGTTTGGGGAATTTGAAGACAATTGACCTTTATGGATCCAAAGAGTTGGTTGAGGTCCCAGACTTGTCTATGGCAA CAAATCTTGATCAAGTAACTCTTAGTGAATGCGCAAGCTTACGTGAGGTCCATTCATCCATATTTTCTCTACCCAAGCTTAGGCATTTGTATTTAGATGG CTGCACACAACTTGAAAGCCTTACTACCCACATTCATATGATATCTCTCCAAACACTTTGGCTCTATAATTGTCCATCTCTCAAGGAATTCTCAGTTACA TCAGAGGAAATGGAGGAGTTGTACTTAAGTGGTACTGCTATTCATTATTTGCCTTCTTCATTTTTTAGGAACAGAAAAATGAAAGATCTGTATCTACAAG GTTGTGTCAATCTGAAGATTGATGGGAACGAGCTATTTGATGACCGGGTAATGGGATCTCTTACATATCTGGACCTTGATGGGTGCAAACAAGTGGATGC ATCAAACCTTTGGCATATCCTTCATGGGGTACCATCCTTAAGAACGCTACTTCTGAGTAACTGCTGCAACTTAGAAGCACTCCCTGACAACATTGGACTC TTGTCATCATTAGAGTTCTTAGACCTAAGTGGAAGCAATGTTGAGACCTTGCCTGCAAGTATCAAGAACCTTTCAATGCTAAAAAGGCTTTACATGGATG ATTGCATGAAACTTGTGTTCGTACCAGAGCTCCCGCCATCCCTAGAAAGGTTAGAGCTAAGCGGAACCAATGTCAAGAGCATGCCAACGAATTTCAAGAA CCTGTCCAAGCTAAAATGGCTTGAATTGGATAATTGCGCGGAACTTGTGGCTCTACTAGAGCTCCCTACTTCCATGAAATCATTAAGTGCTGTCAACAGC ACATCCCTGGAGTTGGACACAAACTTCACTCAACGGCTACTGCTACAACACATATCCTCCTGCTCACTCAAACATTGTAATAAGTATGCCACCCCTCATG AGTATGTTATGTTGCCAGGATCCCATATTCCGGAGTTGTTTAGAAGCACAACACAGACTACTTCAATCACTATTCCTTATCTACCACTCTCTGCCTTATG TGGTTTCCTTCTTTGCTTCATTCTTTCTAAGCCAAACTCATATTTGCAATTTGTTAAGTCTTCTTGTCATATCTATAAACAGGATAAGATATTTTGTGGG ACTAGTCTTAGGTATCTGAACAATGGTGACTTAATTTCAGATCATATCATATTTTGGTATGTTGACATTAAATACCTTCACAAAATACAAAAAGGTGGAG TGAATGATCATTACATCATGTCATTTGAATTTGACATCCAAGACAGCTTCTGTAAGTCGAGGAAGGAGGTGATTAAAGGGTGTGGAGTCCTACCAGTATA TGCCAAGGATTTGGAGTTGAAGCTGGATGGTATCATTACCAAAGATATTGTTCAGTTTCAATCCAATGCTCAAAGCTCTAATAACCAAGAACCAGTCCCA CTGACAGATACCCTATTGCAGGATGAAAAAAAGGAGTTTATTGTAAATGATTCCTGTGACCGCCTCGCGGGTGGAAGTCGAAGCCGGCCTAGTTTTCGGA GATTTTATGCTGCTGCATTGATGCTTCTCTTGATTGCTTCTTTGGCTAAGCAGTAAGCAGTATTTCCTGCTGAATACAGTGTTTGATATGTGATCAATTT GGACTATGAGGATGTCTCATCTCGCATGTGCTTTCAGTGTTCACACTAGCATTCATTTTTGTATACTTGTATTGTAGAGAAGTTCATACATGAGTACAAC TTATGACACTAGCATGTTGTTAATTATACAAGACAAGCTTGGAACCTATTCACAAGTTTTGTTGTGTTGTGATTTCATTGTTAGTACATATGTTTACATG GTTTGAAGTTGATTGTTAATTGTTCTATACCTATCATTGTAGACATAAGGATATGTTGTCTCAAATCATATCCCAAAGTCTGTAACAAACCAAT
• Tissue: pods
• Gene name: LI_gene_154804;
• Additional information: details;

Expression of Ll_transcript_374383

FPKM

• PAB: 0.1
• PNAB: 0.5
• PS1: 0.4
• PS2: 0.1
• PS3: 0.6
• PW1: 1.1
• PW2: 1.1
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_374383

• Blastp: TMV resistance protein N from Nicotiana with 37.81% of identity
• Blastx: TMV resistance protein N from Nicotiana with 34.72% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_020216420.1)
• Pfam: TIR domain (PF01582.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;