Ll_transcript_374386

• Id Trinity: TRINITY_DN47709_c2_g1_i2
• Name Transcript: Ll_transcript_374386
• Sequence: GAGATCATGTAACAAGGTTTTTTGAAGCTTGTGAATTTTTTTCCTGACAGTGGGATACAGGCCCTTTTGGACATGGCACTCATAACTATCTCCTCTGGTA ATACAATAGAAATGCATGACTTGATACAAGAAATGGGTTGGGAAATTGTTCGTCAAGAATCCATTAAACATCCTGAAAGACGAAGCCGATTGTGGAATAC TAAGGAAGTATATGATGTATTGAAAAATAACAGGGGAACTGAAAATATGGAAGGAATAATGTTCGATATGTCTCAACTTCAAAAGGATCTATGTTTGAGC TCCGATTTGTTTGCAAAGATGCCCAAGTTAAGATATGTTGAATTCTGTGATAGGCATAATAATAATAGTAGTAGTAGTAATTATATCTACCTTCCCAATG GTCTTGAGTGGTTTCCTGATGAATTGAGGCACCTTTGTTGGCCTACATATTGTGCTAAGTCATTGCCATCAACTTTTTGCGCTGAAATGCTTGTAGAGCT TCGCATGTCAAACAGCAAACTCGAAAAGCTTTGGGATGGTGTACAGAGTTTGGGGAATTTGAAGACAATTGACCTTTATGGATCCAAAGAGTTGGTTGAG GTCCCAGACTTGTCTATGGCAACAAATCTTGATCAAGTAACTCTTAGTGAATGCGCAAGCTTACGTGAGGTCCATTCATCCATATTTTCTCTACCCAAGC TTAGGCATTTGTATTTAGATGGCTGCACACAACTTGAAAGCCTTACTACCCACATTCATATGATATCTCTCCAAACACTTTGGCTCTATAATTGTCCATC TCTCAAGGAATTCTCAGTTACATCAGAGGAAATGGAGGAGTTGTACTTAAGTGGTACTGCTATTCATTATTTGCCTTCTTCATTTTTTAGGAACAGAAAA ATGAAAGATCTGTATCTACAAGGTTGTGTCAATCTGAAGATTGATGGGAACGAGCTATTTGATGACCGGGTAATGGGATCTCTTACATATCTGGACCTTG ATGGGTGCAAACAAGTGGATGCATCAAACCTTTGGCATATCCTTCATGGGGTACCATCCTTAAGAACGCTACTTCTGAGTAACTGCTGCAACTTAGAAGC ACTCCCTGACAACATTGGACTCTTGTCATCATTAGAGTTCTTAGACCTAAGTGGAAGCAATGTTGAGACCTTGCCTGCAAGTATCAAGAACCTTTCAATG CTAAAAAGGCTTTACATGGATGATTGCATGAAACTTGTGTTCGTACCAGAGCTCCCGCCATCCCTAGAAAGGTTAGAGCTAAGCGGAACCAATGTCAAGA GCATGCCAACGAATTTCAAGAACCTGTCCAAGCTAAAATGGCTTGAATTGGATAATTGCGCGGAACTTGTGGCTCTACTAGAGCTCCCTACTTCCATGAA ATCATTAAGTGCTGTCAACAGCACATCCCTGGAGTTGGACACAAACTTCACTCAACGGCTACTGCTACAACACATATCCTCCTGCTCACTCAAACATTGT AATAAGTATGCCACCCCTCATGAGTATGTTATGTTGCCAGGATCCCATATTCCGGAGTTGTTTAGAAGCACAACACAGACTACTTCAATCACTATTCCTT ATCTACCACTCTCTGCCTTATGTGGTTTCCTTCTTTGCTTCATTCTTTCTAAGCCAAACTCATATTTGCAATTTGTTAAGTCTTCTTGTCATATCTATAA ACAGGATAAGATATTTTGTGGGACTAGTCTTAGGTATCTGAACAATGGTGACTTAATTTCAGATCATATCATATTTTGGTATGTTGACATTAAATACCTT CACAAAATACAAAAAGGTGGAGTGAATGATCATTACATCATGTCATTTGAATTTGACATCCAAGACAGCTTCTGTAAGTCGAGGAAGGAGGTGATTAAAG GGTGTGGAGTCCTACCAGTATATGCCAAGGATTTGGAGTTGAAGCTGGATGGTATCATTACCAAAGATATTGTTCAGTTTCAATCCAATGCTCAAAGCTC TAATAACCAAGAACCAGTCCCACTGACAGATACCCTATTGCAGGATGAAAAAAAGGAGTTTATTGTAAATGATTCCTGTGACCGCCTCGCGGGTATGCAA CTTCACCTTCTCTATAATTTGTTTTTTGCAATGAATTTGATCCTGTAAAAAAATGAGAAATTTTCTGATGAAAAAATTGCATGATTGACCTTCTGGATAT AGTGACATACATAAGTGGTATTTCATAGAGTCCAACTAGAGAAAAGAACAAATAGCTGCTAAAAACAACTTTCATTTAATCCAAAGCTTTCATTCCATGC ACTCTCTCAAATCAATCATTCCGATTGTGTATGATTTATTTTAAGGGAATGATTCTAGTGCCTTTAGTAGTTTGTTAATGTTGATGATGAAACATGCAAT TCTTCTTTCATTATTTATTTGTAGCAGCCGTTTGCTTTTGTCCATACAGACACAGATAACTAGGAATTCAGAATTATGCTTAGTTTAATATTTATCAATT CAGTTTCTTCTTCTTAGAGTTAACTGTGTTTTAATGGAGGATGGTGATGTGATGCAAAAAGGGTTTTTGACTTTGTTCCCAAATATAAACAAAATGTAGT TCGGGTAAAGTTTTTTGGTTTTCCAATTCCCATTATGTTGGTGTCCTTTATCCGTGCATGACTGTTTTTGTTATGGCTTGTGGCATTTCTCTGATTATTG TGGAAATAGGTTGATAAACCCACATCTCTTTACTTCCTTTATTATTTGAAACTTCTAAATAAGCTGTCTGCATCAAATTTTTCATAAAGGTGGAAGTCGA AGCCGG
• Tissue: pods
• Gene name: LI_gene_154804;
• Additional information: details;

Expression of Ll_transcript_374386

FPKM

• PAB: 0.1
• PNAB: 0.1
• PS1: 0
• PS2: 0.1
• PS3: 0.3
• PW1: 0.1
• PW2: 0.2
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_374386

• Blastp: Disease resistance protein RPS6 from Arabidopsis with 31.49% of identity
• Blastx: Probable WRKY transcription factor 19 from Arabidopsis with 35.94% of identity
• Eggnog: leucine Rich Repeat(COG4886)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_020216420.1)
• Pfam: Leucine Rich Repeat (PF07725.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;