Ll_transcript_375830

• Id Trinity: TRINITY_DN47713_c8_g1_i4
• Name Transcript: Ll_transcript_375830
• Sequence: TCATAATTTATGTATATATCTTTTTTTCTTCTCTTTCTTATATATAATTCTGTTTTTCCAAACTATCCTTTGCTGAAAACTGATGAAGAGACAAGAAAAC AAAATGGAGAAAGCAATTCAAAGACAAAAAGTCCTTCTTCAACATCTCCAACCCATCTCTTCAACTTCATCTTTTTCTTCTCAACCTACTACTCATCTCT CTGCTTCAACCTGTGCTGCTGGGAATTTTTCTGAAGATGACGTTGTGGTTGTAGCTGCATATCGGACTCCGCTTTGTAAAGCAAAGCGTGGGGGCTTCAA GGATACCTATCCAGATGATCTACTTGCCACTGTTCTGAAGGCTGTAATAGACAAAACAAATTTGGATCCAAGTGAAGTTGGAGACATAATTGTTGGCACA GTTCTAGGACCAGGATCAGAAAGAGCAATTGAGTGCAAAATGGCAGCATTTTATGCTGGTTTCCCAGCAACGGTGCCTCTTCGAACTGTCAATAGGCAAT GTTCATCTGGCCTTCAGGCTGTTGCTGATGTTGCTGCATATATAAAATCCGGCGCCTATGACATTGGCATTGGGGCTGGATTGGAGTATATGTCACAACT TAATACTTTAAGCTTTGGCAAAGTTAACCCAAAGGCAAAATTGTTTCCTCAAGCCGGGGATTGTCTTCTTCCGATGGGAGTCACTTCAGAGAACGTCGCA GCACGTTTTGGTTTGACAAGGCTGGAGCAAGACCAAGCTGCTGTTGAGTCTCATAGGCGCGCTGCAGCTGCAACAGCAGCCGGTAAATTCAAGGATGAAA TTGTTCCTGTTCATACAAGGTTTGTGGACCCGAAAACTGGAGAGGAGAAGCAAATTATAGTATCTGTTGATGATGGTATCCGACCACAGACGACTTTGGC AAGTTTGGCAAAGTTGAAGCCTGTATTCAAGGCTGATGGTTCCACAACAGCAGGGAATGCAAGCCAAGTCACTGATGGTGCTGCAGCAGTGCTCCTTATG AAGAGAAGAATAGCTTTACAAAAAGGGCTTCCTATTCTTGGAACCTTCAGGTAAATAATACTGATGCAAACACAATGAAATTCTTTTTATCAAATATCAG TTACATCAATTGTTTTTACACAGAACCAACATGGCGTTGGTCTAGTGGTGTAAGGCCCCACTAGATCCTCAGAAAAACCAAAAGTTCAAGGGTTCAATTC CTGTGTGTGACAATTGTTGTGTATACACATATCCTTGAATTGGTGCACCACTTGCATATAGTTCCTGCAGTTAATGTTTTTTCTTCTTCTGTATATTCCA TATCTAATCTATACAATTAGCATTTTAAACAATTAATTTGATTATGTTCATTTAACATCAAATTACAAAGATAGTCTTAGTTTCCTGAAAGTACATTTTA GATAAATATAAACTATAGAACATGTCAATAAAAATATGAAATACTCATAATTTTGTAGGACATGCATATAACATCCCCTAGAACATGAAAAATATTCCTA ATTATATATACATGTAATCACTTATTTAGTTCTTCATGTGAAAATATGTTCAATGAATCAGTAACTCATTATCACATGGAAATATATTCAAACATGAACT TAATCAAAGTTAAGATTCTAATACAACCTCATTGTTCATCCTTTATTCAATTTCATAGGACTTTCACTGCTGTTGGAGTAGATCCTGATATCATGGGTGT TGGACCTGCTGTTGCTATTCCAGCTGCAGTAAAATCCGCTGGCCTTCAACTTAGTGACATTCAGTTGTTTGAAATCAATGAGGTAACAAAGTTTTAGTAG TTGTCAAGATCAGTATGTGGTTGCAGTCGCAATTGTAGTTGTGGTTATATAGCGATTGCAGTCATTGTGGTGTGAATTATTTTGCGAGTAAACAAATATT TTTGAAACGTATGTGATCTAATGCGTCCCAATGTGGTTGTGTTGCGACCTAAGTAACCAAAATGCAGTCCGATACGGTTGCATTGTGGCCACATCATTAT GACTCGGTGTCACAACACAATTGTTGTGCAATGCAGTTGCAGCGGTCTTTGCAACTGCAATATTACAGCTGCATGGTCTGTAATTTGAATTACTGGCCAA GATAATTGACAACATCCTTTTATATCAAATATGCAACTTTAGTAAATCTTGTACTAAGCAATATATTGGTCTTGTGTAGGCATTTGCTTCTCAGTTTGTT TATACTTGCAAGAAATTAGGACTTGATACTAACAAGGTCAATGTGAATGGTGGTGCCATTGCTTTCGGACATCCTTTGGGCGCTACAGGTAAGGTTCATC GATTTTCAGTTAGAATCCGGATAAACTCAATGCACGAGGATCCTACTTAGTGTAACTATTTCATGTCAGGTGCACGATGTGTTGCAACATTATTAAATGA GATGAAGCGTCGTGGGAAGGATTGTCGCTATGGCGTAATCTCAATGTGTATAGGTTAGTTTTTCTTCTGATCTCTCCTCAACTCAAACCAGATAAAACTA TTGAGCATATGAACATGACACATAGTACTACATAATCATTTTAATTTATTAAAGTCTAGATTAGTTTCAGTGAAAGTATGATTATAATGTGAAAGTTTGG GTGATATAATTTTAGAATTCTTTCAAGATTCATAGGACAAAATGGTCATCTGATTGTGGCTGAATGTAAGTTAAAGCACTGGTCTGGTGAGATGTGTTAG GTTGGTTCAGAATCCTCTCCGGTACCCGAAAGGAATCTGCATAGAAAACAAAGGAAAGATAGTATAATATGACACTTTTATCCTTTATATATAATGTGAT GAAACTATTACCCTTTAACACCTTAAATGTAAAAGTAAAATTAATAACTTTTCCGAAATCTATTTTGTTATGTTAGCACTATAGATTCACATAATGCTGA TATTTTTAACTGGTGCCTGAACATGAGATTGTAGTATTTGTTCCAAAATTAGACAGCATTTTATTTCATAAAAAGAATTACTTCAGAGTAGGAAAATAAA TGAACCAAGGAATTATTTTCTTACTATAAAATTAAGAGTTTAATACTTATGCAGTAATGACAGTAAAGTTTTTATATTGTCAACTTATCATTTATCATTC ATGCGTTGATCAATATACTGCAATGATGGATGTTGTGAGTAAATCTCTAATGCATCTATGGAAGTTTATTTTTCTTTGTGATCCTTAACCACATTGCAGA AATTTAATATGATGCATCTGCATATCAAGATAATACAAAAAGATGGAATATCTATACACATGAAAAGATTTATACATCGTACACCATTGTTTATATTATT TATGTTTAAGAGTCAATAATAATTAAATATGAACAATGTGTTATATAACAATAATGTAAAAAACTCTCAAACTGCATACATTTTTTTCCTCTCATATGAT AACCATATTACTAATACATTGATTAATATCAAAATTGGGATTTGAATGATTTCAGGGTCAGGCATGGGAGCTGCTGCTGTATTTGAAAGGGGTGATTTTT GAAGATTAGGAGATTTTAGAATGGTTTGAAAGAGTATCAATCTTTTTTTGTGAGAGGGTGATTCTTATATTTATGGTTTCCAACCATTTTTCTACTTAGT AGAAAGCAATAAATGTATCACACCAAAAATTAATAAATTCAAACATTTTTACCATGTTTAATGTTTTCTTATTAATGTGTGATGAGGATCAACTGTCTCA AAGCATGTCCCCAACCATGTACCGAGTCAATCAGAATGAAGAAAAAATAAATGAAAATATGAATATTTAATTTTTTGACTGATGTGT
• Tissue: pods
• Gene name: LI_gene_154842;
• Additional information: details;

Expression of Ll_transcript_375830

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0.3
• PS2: 0
• PS3: 0
• PW1: 0.5
• PW2: 0.2
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_375830

• Blastp: 3-ketoacyl-CoA thiolase 2, peroxisomal from Arabidopsis with 72.53% of identity
• Blastx: 3-ketoacyl-CoA thiolase 2, peroxisomal from Arabidopsis with 72.22% of identity
• Eggnog: acetyl-coa acetyltransferase(COG0183)
• Kegg: Link to kegg annotations (AT2G33150)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463412.1)
• Pfam: Thiolase, N-terminal domain (PF00108.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;