Ll_transcript_442128

• Id Trinity: TRINITY_DN47805_c0_g1_i1
• Name Transcript: Ll_transcript_442128
• Sequence: AAAAAAAGTAAACAAGTTCACTAAACCCTTCATCCAAAGTCTCAAAATGGGGAAGAAGAACAAGAGTAGAGACGCAGACGCCGAACCCAAACTCACCGTC ACGAATGGCCATAGCGACGATTCTCCAAAAGCAAAGAAGAAACATAAGAAGAATAAGAATAAGGACCAAAACGAATTACCCACAGTTAGCATAGCCGTCG CTGCTTCCATCATTGACAACGTTCCTACCCTTGAACTCGCTACTCGGTTAGCTGGTCAAATCGCTCGTGCTGCTACTATTTTTCGAATCAACGAGGTTGT TGTATTTGATAATAAAAGTATTGTGGGACAAGATTCAACGGTGGATAATTTAGATGATGAAAGTAGTGCAGCCTTTTTTATAAGAGTTTTGCAGTATCTT GAGACTCCTCAGTATTTGAGAAAGGCTCTCTTCCCAATGCATAATGACCTCCGATTTGTGGGCCTGTTGCCGCCCCTTGATGCGCCACACCATTTGCGCA AACATGAGTGGGGTCCTTACCGGGAAGGTGTCACATTAAAAGAAAGAGATTCAAACAATGGTGCAACACTGGTTGATGTTGGTTTAGCAAAGCACATTTT AGTCGATCAAATACTTGAACCTGGAAGAAGAGTTACTGTAGCCATGGGTACCAACCGCAATTTGGATTCAGATTTACCACGCCAGGTTGTCTCATCATCC AAGCCAAGGGAAGAAGGAATGTATTGGGGATATCAAGTTCGTTATGCGCATAATATTAGCTCAGTATTTAAGGATTGTGCATACAAGGGTGGCTATGATT ATATAATTGGTACCTCTGAGCATGGCCAGATTATTAAGTCATCTGATCTTGAAATACCTCCTTTCCGGCATTTATTGATCGCGTTTGGTGGACTGGCTGG GTTGGAAGAGAGTATTGAAGAAGATGAAAACTTAAAGGGAAAGGATGCAGGGGATGCATTTAGTATATACTTAAATACATGTCCACATCAGGGTAGCCGA ACAATTCGAACTGAGGAGGCTATTTTAATATCTCTTCAGTACTTCCAAGAACCAATAAGCCGAACATTGCAGAGTTGATTGTTGTGGTGTTTGCCAAAAA CTCATTTAGGATTTTTCACATGGGTAGCTGTTCCCTGTCAACACTTTTGTATTAGTTCAAGTGTTTATGACTGAATCTAAGATGCAAGCAATATTTCAAA GCCAGTATTGAATTTTTTCCCTCTACCTCATCCCAAACTGGCCCTCGGGTCTTAAATTGCATTCTCTAACCGCATTTAGTGTAGTTTTGGGAGTCGCCAT AATTACAATTCGCCAGCCACATTTCTCGCAACTGCAGTACATGCAATGTAATCGCCAACGCGATTTAAAACCATTGCGGGTTCATCAAGATTCTTTGGGA AGTTCTGATATTTTCTGTTTACCTAGACTGTATAAGTTCCAAACAGTATTTGTTGTTCATTTATATATGTATTGTATTCTTATTAACTCTATTAGATAAC TGATATTGCATCTGAACTTAATTTAAAAAGTAATTGAAGGGTGTAATAAGAGAACCATGTAAAGCCATCTGAACTGATGTATTTCCTAGTGTAGAGTGAT TTTTGAGCTGCACCACTGAAAGCCTATAGCTATACTTATATTCCTAGGAGAAGCATGTAGCCATGTGGAGAATGTAATAAGAAATGCAGAATGGTCAC
• Tissue: pods
• Gene name: LI_gene_155623;
• Additional information: details;

Expression of Ll_transcript_442128

FPKM

• PAB: 2.2
• PNAB: 4.6
• PS1: 3.5
• PS2: 3.6
• PS3: 3.1
• PW1: 3.1
• PW2: 2.7
• PW3: 2.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_442128

• Blastp: Putative methyltransferase C9orf114 homolog from Mus with 46.69% of identity
• Blastx: Putative methyltransferase C9orf114 homolog from Mus with 47.64% of identity
• Eggnog: chromosome 9 open reading frame 114(COG2106)
• Kegg: Link to kegg annotations (227695)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441569.1)
• Pfam: Putative RNA methyltransferase (PF02598.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;