| Id Trinity | TRINITY_DN47805_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_442137 |
| Sequence | AAAAAAAGTAAACAAGTTCACTAAACCCTTCATCCAAAGTCTCAAAATGGGGAAGAAGAACAAGAGTAGAGACGCAGACGCCGAACCCAAACTCACCGTC ACGAATGGCCATAGCGACGATTCTCCAAAAGCAAAGAAGAAACATAAGAAGAATAAGAATAAGGACCAAAACGAATTACCCACAGTTAGCATAGCCGTCG CTGCTTCCATCATTGACAACGTTCCTACCCTTGAACTCGCTACTCGGTTAGCTGGTCAAATCGCTCGTGCTGCTACTATTTTTCGAATCAACGAGGTTGT TGTATTTGATAATAAAAGTATTGTGGGACAAGATTCAACGGTGGATAATTTAGATGATGAAAGTAGTGCAGCCTTTTTTATAAGAGTTTTGCAGTATCTT GAGACTCCTCAGTATTTGAGAAAGGCTCTCTTCCCAATGCATAATGACCTCCGATTTGTGGGCCTGTTGCCGCCCCTTGATGCGCCACACCATTTGCGCA AACATGAGTGGGGTCCTTACCGGGAAGGTGTCACATTAAAAGAAAGAGATTCAAACAATGGTGCAACACTGGTTGATGTTGGTTTAGCAAAGCACATTTT AGTCGATCAAATACTTGAACCTGGAAGAAGAGTTACTGTAGCCATGGGTACCAACCGCAATTTGGATTCAGATTTACCACGCCAGGTTGTCTCATCATCC AAGCCAAGGGAAGAAGGAATGTATTGGGGATATCAAGTTCGTTATGCGCATAATATTAGCTCAGTATTTAAGGATTGTGCATACAAGGGTGGCTATGATT ATATAATTGGTACCTCTGAGCATGGCCAGATTATTAAGTCATCTGATCTTGAAATACCTCCTTTCCGGCATTTATTGATCGCGTTTGGTGGACTGGCTGG GTTGGAAGAGAGTATTGAAGAAGATGAAAACTTAAAGCTGTTGTGCTCTGCTTGGAGTTTAGCTAAGAAGAAGGAAGAACTGCGGTACTGAATACATACT TTCTTGCTCCCAAAAATACAGGGAAAGGATGCAGGGGATGCATTTAGTATATACTTAAATACATGTCCACATCAGGGTAGCCGAACAATTCGAACTGAGG AGGCTATTTTAATATCTCTTCAGTACTTCCAAGAACCAATAAGCCGAACATTGCAGAGTTGATTGTTGTGGTGTTTGCCAAAAACTCATTTAGGATTTTT CACATGGGTAGCTGTTCCCTGTCAACACTTTTGTATTAGTTCAAGTGTTTATGACTGAATCTAAGATGCAAGCAATATTTCAAAGCCAGTATTGAATTTT TTCCCTCTACCTCATCCCAAACTGGCCCTCGGGTCTTAAATTGCATTCTCTAACCGCATTTAGTGTAGTTTTGGGAGTCGCCATAATTACAATTCGCCAG CCACATTTCTCGCAACTGCAGTACATGCAATGTAATCGCCAACGCGATTTAAAACCATTGCGGGTTCATCAAGATTCTTTGGGAAGTTCTGATATTTTCT GTTTACCTAGACTGTATAAGTTCCAAACAGTATTTGTTGTTCATTTATATATGTATTGTATTCTTATTAACTCTATTAGATAACTGATATTGCATCTGAA CTTAATTTAAAAAGTAATTGAAGGGTGTAATAAGAGAACCATGTAAAGCCATCTGAACTGATGTATTTCCTAGTGTAGAGTGATTTTTGAGCTGCACCAC TGAAAGCCTATAGCTATACTTATATTCCTAGGAGAAGCATGTAGCCATGTGGAGAATGTAATAAGAAATGCAGAATGGTCAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_155623; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_442137
| Blastp | Putative methyltransferase C9orf114 homolog from Mus with 45.38% of identity |
|---|---|
| Blastx | Putative methyltransferase C9orf114 from Homo with 44% of identity |
| Eggnog | chromosome 9 open reading frame 114(COG2106) |
| Kegg | Link to kegg annotations (227695) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019441569.1) |
| Pfam | Putative RNA methyltransferase (PF02598.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |