Ll_transcript_443006

• Id Trinity: TRINITY_DN47828_c0_g1_i2
• Name Transcript: Ll_transcript_443006
• Sequence: CTGTAACCTGACTGCAATTTTGATTATAGTATTTGAAGGTAGATCCTGCAAAATTTGAAAGATTTCAATCTAAGTTGTTCTTTAAGGGTATCACTTCCAG TACGGGATGCAAAATTTTATTTAAAATTAAAAGTACAGGTACAACTGGATATATCATGTGAAAATATAAAAACATAAATAACAAAGTAATCATTATGTGA AAACAATATTCACAATGTTCTAATAATAAGGTATTAAGGTTTCAACAAAACTCCATAAAGTATTTCAAGTAAGCACAATAAAGAAAGTGAATAATTCAAA AGGGGATGAAGAAATAATTTGTTCCGGTAAGTTGCAAATCAAATGATTTAGCAATAAAACTTGGCGTTTAACATATGCTGATGACATGTACTTCACAATA ATATTTGGTTCCTAGTCATCGAGTATCGGTAGACGGTAAGTATCCATGTGTACCCAACAAGTATTGCTACGGATGCATACCCTTTTATGGTAACCATTTT AAGTAGCCATACATTATAGATTTCAGTTATGATATATTTGACTGCATCAATGTTTTTCCAGATGCTGTGAAGGAGATTTTGAGTACTTGGCCTGAGGTTT GTCAGTTATGTGATTCGAAGAACACTAGCCCCCTATATTCAGCTGCTGAACATGACCATTTAGATGTGGTGAATTCTATATTGGATGTTGATATGAGTTC CATGATGATAGTTCGGAAAAATGGGAAAACTGCATTGCACAATGCTGCTAGGTATAACATCCTTCGCATTGTAAAGGAACTTATTGCCCGAGATCCAGCA ATAGTGTGCATCAAGGATAAAAAAGGTCAAACTGCACTGCATATGGCTGTCAAAGGACAGAGTAGTTCACCTGTTGAGGAGATATTATTAGCCGATCCTA CTATATTGAACGAACGGGATAAGAAGGGTAATACAGCTCTTCACATGGCTACGAGGAAAGGCCGTTCACAGATAGTGAACCTTTTGCTAAGCTATACAGC TATTGACATTAATGCTATCAATAAGCATAAGGAAACAGCATTGGATTTGGCAGATAAACTGCCATATGGAGATTCAGCTTTTGAAATCAAGGAAGCACTT GCAGAATATGGTGCCAAGTATGCCAGGCATGTCGGCAAAGTAGACGAAGCCATGGAACTCAAGAGAACTGTGAGTGATATAAAGCATGAAGTGCAGTCAC AACTTGTACAGAATGAAAAAACTCACCGCCGAGTTTCTGGCATCGCTAAGGAGTTGAAGAAACTTCATAGAGAAGCAGTTCAGAACACCATTAATTCGGT CACAGTGGTTGCTGTCCTTTTTGCATCCATAGCATTCATAGCTATATTCAATTTGCCTGGTCAATATATAATGTCAGGACCAGACACGGGAGAGTCTAAT ATGGCCGGTCACATCGGTTTCAAAGTTTTCATCCTATTGAATTCTACATCACTTTTCATTTCTCTTGCAGTTGTTGTGGTTCAAATCACATTGGTAGCTT GGGACACAAGGGCTCAAAAAAAGATTGTGTCAGTGATTAATAAGCTCATGTGGGCTGCATGTGCATGCACTTGTGCTGCTTATCTTGCAATAGCTTTTGA GGTTGTTGGAAAACAAACATGGATGGCTGTTACAATCACCCTTTTGGGAACACCAATTCTACTTGGCACTCTAGCATGCTTGTGCTACTTTGTTTTTAAA CAACATTTCGGGAGTTTCCGCGGTGATCGGATAAAGAGAGCGAGCGGAAGCAAATCTTTTTCGTGGTCTTATTCTGCACATATATCAGACTTGGATGAAC ATGATTCTGACATTGACAAGATCTATGCATTGTAACTTGTAAGCCAAATATCATAATAGCACTGTTTCAGCCTTTTAGCTGAAACTATATCTCACTGCAA AAGTTGCTATGTGAAAATGTTTGGTCACTATTCTATAGGATTCATATTGAGTTTACAGTTCAAGTTTCAGGTTGTTGGATTTGGTAATATATGTAATTAT TTGTTCAGAATCAGGACTCGAATGTAGATTTATGTATATGAGAAAATATCCAAAATAGGTACAGAATTTATTACAACTTGAAAATGAATTATCACATGCC TTTTGATATGTGACATTCCAGATCAATGCTGATGTAGCTGGTATCTTTTTGGAAGAGGTTGTAGTTACCCTG
• Tissue: pods
• Gene name: LI_gene_155854;
• Additional information: details;

Expression of Ll_transcript_443006

FPKM

• PAB: 0
• PNAB: 0.8
• PS1: 0.2
• PS2: 0.1
• PS3: 0.6
• PW1: 0.3
• PW2: 0.3
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_443006

• Blastp: Ankyrin repeat-containing protein At2g01680 from Arabidopsis with 71.47% of identity
• Blastx: Ankyrin repeat-containing protein At2g01680 from Arabidopsis with 70.59% of identity
• Eggnog: Ankyrin Repeat(COG0666)
• Kegg: Link to kegg annotations (AT2G01680)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019423532.1)
• Pfam: Ankyrin repeats (3 copies) (PF12796.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;