Ll_transcript_443271

• Id Trinity: TRINITY_DN47853_c1_g4_i8
• Name Transcript: Ll_transcript_443271
• Sequence: TTGTGACTAGCGAAAGAAAATGCAAGCAACAAACCAGAAGCAGAATTGTAGCAATTAGCAACACACCATGTCGTCTTCCCCTTCTTTTTCATCATCAGAA TCAGAATCAGAAACTCCTCACAACCTAATCCCATCCCTCCCCGATGACGTGGCAATTAACTGTCTCTCCCGTGTCCCTCGTTCCCACCACCCAACCCTCT CTCTCCTCTCCAAACCCATCCACTCCCTCCTCTCCTCCCCTCTCTTCTTCTCCTCCCGCTCCTCCCCCGAACACCTCCTCTACCTCACTCTCCGCCCACG CGCCTCTCCCTTACAACACTTCACGCTCCACCTCAACCCCTTCACCAACCGCCGCTACCTCGTTCCCCTCCCTCCCACCCCTTCCCCCTCCGTTGGCTCC GCTTATGCTGTCCTGGGACCCACCATCTATGTCATCGGTGGGTCCCGCAATGATATTCCTTTTAATCATGTTTGGCTTCTTGACTGCCGCTTCCACCGTT GGATCCCTGGTCCCAGCATGCGCGTCGGGCGTGAGTTCCCTGCTGCTGGTGTTGTTGACGGTAAGATCTATGTTATTGGTGGGTGCGTGGCGGACACGTG GTCACGCTCTGCTGCATGGGCGGAAGTTTTTGACCCTGCTGTGAACCGGTGGGAGCGCGTAGCGAGCCCGGTCGAGTTTCGGGAGAAGTGGATGCACGCG AGTGCTGTAATTGGTGGGAAGTTTTATGCGATGGCGGACCGTGGTGGGATGGTGTTTGATCCGAGGAGTGGCGTGTGGGAGAGTGTGGGGAGGGAGATGG ATAATGGGTGGAGGGGGAGGGCGTGTGTAGTGGATGAGGTTTTGTATTGCTATGATTATTTGGGGAAGATTAAGGGTTTTGATGTGAGGAGTGGGGTGTG GAAGGAGGTGAAAGGGTTGGGGAAGGGTTTGTTGCCGAGGTTTTTGTGTGGCGCTACGATGGCGAATGTTGGCGGGAAATTGGTCGTGGTTTGGGAGTGT GATGGGAATGGGAAGGAGATGGAGGTTTGGTGTGCTGAGATTGAGGTGAAAATGGATGGGACTAATGGAGAATTGTTGGGTGAAGTTGGTTGGATTGAGA AGGTTCTTTGTGTTCCTAAAGGCTCATCCATTGTGCAGTGTTGTTCTGTCACATTGTGAACTAATGATGTTGAGCACTTGGAGTTTGATGCATATGGCGT ATTTGGGTACGAGGTATTGGATTCTTGTTTTTTAGGGATCCTCTGTTTTTTCTTGTTATGTGTTATAAGCCTCAACTGGTTATGTTTGGATTGGTGGAAA TGAATGAAAGAAGGGGAATGAAATGAAATGAGAATAGGTTCAATGGTTTAGTTGGTTTAAAATATGATACACTGGAAGGAACTTATTTTTCATTCCATTT AACTCCACTGCATTCATTGAAAAATTATTTTATATCCTTTGCTTTCATCTATCTTTGGCATTACCACGTGACAAGAAAAATACAGGATGCATTCCTTAAT TACTATATTGATTTTTCTCAGTCTATTTGAATTGATGTAGAAAAGGAGTGGGAGTGGTTAAATTGGATATCTGCCTTCAACAAGTCTTCAGTTTCCATCC ATTCTGCTGTTATCAGTTATCACTACTTCTAATTTGTAAACAAAATCAATGCCAACTTATCTGGTAGCCTTGGTGTTGATTAGCTCATTTTATTGTGTCT TTTGTAGACTAGTTTTGTCGAATATTTGTTGTCTTGGTTAAAAGAGTGACTGTGAATAGTTCACTTACAAAGTGTTGTCATAAGAAGTTGCCATCTACCA CAAATTTCCAATGTCTATGAGCATTCCATGTGTTGAGCTTGTGTAACATGTAAAAATTTTATAGGGGTATTTTGACTAGAATGAAAAGAATGGAACATTG ATAGGGTATTTTGATAGTGAGCTTGATTTTGTGAATTGGTTTAATATATCTTTCGATGTTGAGAATTTTTGTCAGTCAATACTCCTTTCTAATTTAATAT TCTATGCCTTTTTTTCTCTCTTTTCGGCAAGCAAGATTGCTGATTAACCATGTTATGGAAAATCTCTCTGCTATTTCAGGTTTCTACAGCAAATGTCCCA TAGGATCGAGATCCTGAATGTGATACATTAAATTGCTTCTACCTGATCTGAAAAGTTTTGATCAGGTTACATCTATAGCTCCATTGTTGTATGAAATAAA ACAGGAGCTGCTCAAATAGTACTGCATCTTTACAACTGTAAAATTGCCATCATAGTTTATCTCTTCCACCTTATGAGTCAATGGAGAACCCGAGCCAATT ATTACCAGGATTTTTGGCTCTGATACTTGTTACTGAACAAATACTAGTGTCGAATGTAGCGTGAATGTGTGTATTATGTTGAAAGTAATGGCATGTGCCT TCTGTATCTGTTTCGTCTTACTATTCGCTTTGCTGGGACACATGCATTGGTTATAGATGATGCATCCTTGTGTCTGTGGAATTAAAGTTGTTAACAAACA TTGAATTTCATCTTATTGGATTTGAACGAAATTCTTATTGTATGTTTAGCCATAATATGACACTGGCCCCGACAATGAGTTTTCAGAATTTAATTGAAAG AAAATTTGTGCAGGTTCAAGCTAAAATAACTTGTGCAAATAATGCAAGATTTCACAAGTTTGTTGATATGGTTAAACAGAAATTACAATCAAAAGTGAGA GTTCTCAACATTTGTGGCTAAATATAGGGGTTGATGAGATGGCAGTTATTTGAATCAACTATATGGATCAAAATGACATTACAATGCTTATTAGTGTTTT TTGTGACAAGACCGTGTCTCTAAATCCTTATTTGTTTTGTGTGACATAGGGAGTTCATATCTATCTACTATCTTCAATTCTCTTGTACATTGCTTCGATC TAATATATTCACTGACTTGTGCATTGGAGACCTTAGTAAGTATCTATAATTGTTGTGGAGACATTGAGAACACCTAAGCCCACTGGAGGAAGGGTGTTCT TCCATCAAAGAACATTGGGGCTCTTTGTGGGATCAAATAAGTTTCAAATCTTACCAACAGAGTTACTTTCATAGGACAAACTACCCCAACAAATCGTTCT GATACCATCATCCCAAGCCTTGGAAAGTAGGAGCAAGAGGGAGCAGAGACTTTAGTTACTGTAATATTCCATCCTATCGCCCTTGGTTGCATGCCAATAG CTTTCTTTCTCCTCCATCTATCCAGCAGAGCTTTTAAGTTGATAGAGCTATTGTAATTGCATTATACAATCTCGTCAATAACAGTTGTACTGTTTCTTCT GAATACTCTGGTTAAACTAATGGCTAATGACTAGATCATTATATGTAGTGTTGGAAATATGACAAATCAAGCTTTAGTTCGGTTTAACTCGATAAATATC TACCCAATTTGACTTTAGTTATTTTTTTCATCTTTAACTTAACTTGATTTGAATTTGCCAACTATTTGATTCAACTTTTTCACTCAAAATTGTTTAGTTC ATTAGGAGTTCTTGAATTGTTCACTTCAACTTATTAGCTTGTTGGACTAATCTTGTCATATCAAATCTGG
• Tissue: pods
• Gene name: LI_gene_156079;
• Additional information: details;

Expression of Ll_transcript_443271

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0
• PS2: 0.1
• PS3: 0
• PW1: 0.1
• PW2: 0.1
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_443271

• Blastp: F-box/kelch-repeat protein SKIP6 from Arabidopsis with 53.33% of identity
• Blastx: F-box/kelch-repeat protein SKIP6 from Arabidopsis with 51.11% of identity
• Eggnog: Kelch repeat-containing F-box family protein(ENOG4110X8D)
• Kegg: Link to kegg annotations (AT2G21950)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019430235.1)
• Pfam: F-box domain (PF00646.32)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;