| Id Trinity | TRINITY_DN47854_c8_g2_i6 |
|---|---|
| Name Transcript | Ll_transcript_442853 |
| Sequence | CTTTCTCTTTCTTTACCTTTTCAACTTTCAACCCATTTTTCTTTCACTTCAAATTTTTAATCTTTTGCATTCAAATATATCGTTTATGTCTTCAGTTTTT AGATTGAAATATGGGTTTTCGTTTTCCCAATGAACAAGATCAGTTTTTTTGAGTTAATGTTCCTTCAACCAATGTTCATGTATTAACTATCTTCTTATTG CAATTATTCCTTTGATTCTTATTTGATAATGCTTATAATTTAGTGTTTTATTTTTATAAAAAATATGATTTGATGGAAATAATTGGCCTATTGTTTGAGA TAATGAACTATAGCCAATGTCTTCTCCTTTTTGTTTGATTTGGATGTTAATTATAGGATTTGATAAGAGAAAACAATGTGTGTCTATGTTATCTTTAAGT TGAAGATTGTATAACACAACCAACGGGTGGTTGGTTCAAGTGGTACATGTTTGTTTCCCTTTGAGCAAGACCCGAGTTTGAGTCTTGTGTGTGCGGAGGA AAACTCGTTCGAGTGCTAGCCACACTATACTATATATGTTCTCGGCTCTCGAACAGGGTTGTCTATGATGTTGGTTGGTATGATTAGCACACTACATCTC ATAAACTAAACCCATATTAGGATGGTTGATTTATTTGATTAATAGTATAGGTTTAATTGATAAAATTGTAAAATTTCCTTTGATTGAGTTAACTATAATT GCAGCCAATAATTTATAATGACACATGATAAAAAATCATTGTTAGTTGCTACCTAACCATAGCTACCACGTATGTACAATAACAACCACGCCTTTATCTC ACTAGGTGGGGTCGGCTAGCTACCATGTGTATACAAGTTTGTAAATTGTTTTGGGTTAATGGACTCCCGGAATGATATCGTAATTCAGGAAAATGCTATA ATCTTGTATTTCAGCATATAATATGTAATTCGGCATATATTATTGTCTGGATTTGAGATATTAGGGATTTGCTTAGAGTGCAGTTGTCCTTCTATGCATG GAAATATGTAGGATAACTCCAAGGGATCCAACCTCTGAATTTTTCTTTTTAATATGATATCTTTCATTGTTCTTTTAAACTTGAACTATTCACCATATAT TTATGTCTTACTGCTATGCTGGATTTAACATTAGAAGGTCGGAATTATACGATAGTTCGTGCATCGATAGTTTTTCTTTATTTTTGTATTACGTTTTCAC TTTTTTTTTTTTACATTTCCAGTTGTAGCTGCTGGTGCATTTGATGAACAATTCTTGATAGAATAATTCCTTTTGTTTTTGTTATTGAATTCAGGTGAGG ACAGGATCCACAATGTTTTCGTTATTGCAAGTACCTAGATGCAGAATTCACTGCTTAGCTAACTATTGGGGTGAAACATTCCACAGTTTCAATAAGACTT ATGGAGACAATTCTAGTACTATCAGGTTGCTTAGTTCGAAAACTTACGGGCTTCAGGGAGGGCAAAGAAAGAAGTGGACTAGAAGACCGATAACTACAAA TACCGAAGGCACTGGGAGAACCAAATCAAGAAGTACCAAGAATGAAATTTTGAGTGAAACAATTTTAACAAGTGCTACTGTAAATGTACATAAAGCACCG ATAGATCAATCACAGGCAATTCAGGACTGTGTCATACAACAAGAGATTGCCCAGAATAAAGATTTATCTAGCTTAGTCACCGTTATTGTTTTTGACATCG AGACCACCGGGTTTAGCAGGGAGAAGGACCGGATCATTGAGATCGCACTTCGAGACCTTCAGGGTGGTGAGAACAGCACTTTCCAAACTCTTGTAAATCC TCAACGGGATATTCTTAATTCGGAGATTCATAGCATTACTACACAAATGGTCGACAGACCTGATGTTCCAAGGATGGAGGATCTGGTTCCCATTTTAATG CGCTATGTTCAAAGTCGTCAGAAACCTAAGGGACATGTGTTATTGGTTGGTCATAATGCTCGAGTTTTTGACGTACCCTTCATCATTCATGAGTTCCGTC GCTGTTCTACAGAGATTCCTCTGGATTGGCTGTTTCTGGACACAATGTCTTTAGCTCGTGATCTGAGGAATTCGGATGGAACCAAACTTTCTTCGAAATC CCTTGCTGCTCTTCAGGAACTCTACAGAATTAAAGTCGACGGAGAAGCTCACAGGGCTATGGTTGATGTGAACACATTGACGTCGATACTTCCTAGGTTG ACATATGATCTGAATCTGACCCTATCCGACCTCGTTTTCAAGAAATCATTCAGAGGATCGGATATTGTCGATTCGAAGAACAAGAAGAAGAGTTCATAAT AGTTTTCTAACAGTATTTTGTAGTGTTATTGTGACCAAAGAATTATTTGTAACTCTAGGAGTTGTATAATTGAAGTGAAAAGAAACATTGTTTGTAATTG TTGACATATTATTAAGAGTAATATACATGGTTATTATGTTCCAAATATCATCATTGTCAATGAGATTTATGATTATTTAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_156098; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_442853
| Blastp | Exonuclease DPD1, chloroplastic/mitochondrial from Arabidopsis with 45.29% of identity |
|---|---|
| Blastx | Exonuclease DPD1, chloroplastic/mitochondrial from Arabidopsis with 45.51% of identity |
| Eggnog | three prime repair exonuclease(ENOG4111YSP) |
| Kegg | Link to kegg annotations (AT5G26940) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419638.1) |
| Pfam | DNA polymerase family B, exonuclease domain (PF03104.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |