Ll_transcript_442260

• Id Trinity: TRINITY_DN47884_c3_g1_i3
• Name Transcript: Ll_transcript_442260
• Sequence: CTAAGTGAAACTAAGATTAACATATAATTTGTTGCCCTTAGCCACAGAATACCTAAGTGAAACTAAGATTAACATATAATTTGTTGCCCTTAGCCACAGA ATACCTAAGTGAAACTAAGATTCACATATGTAGATTTTTGCTTTGAGGGTGAACTGAAGTTTTTATTTCTCTTTCATATGCATGCCCAATATGTTTTGCT GCTACAAGGCATTGAACAGAGACATAACTTATGCTGTTGCACAAATACATCCTTAAACTGTATGGGTAAATTATTTGCATTGTATTTCTGCATTGCAGCT TACACTGACATACTGTTTTTTCACCAATTCATGCATGCCAAACCTCTTTCCGGGCTTTTAAAGGAAATAAATTATCAATGTTTCCAAGAGACCAAGATCG AACAGCTTTGCATTGCATTCCTTTCTGACTGTATTGGAACTAATTTAAAGAGAGATTTGGTTGGGGTTGTGGTATACCGTATACACAGATTTAAGTGCAT TTCATACTGTATGTCATCAGTGCATGTGCATCATATACAAGAACAAGATAACCACTTATACAATTTGGTAGTCTTTACATGCATCTGTGCACATCTGGCT TGCTTCTTTGAAGTCAATTTGGTAACTGTCTCTTGCTATAGTTGTGGCAACTGATGATGAAAAGATTGCTGACTGTTGTCGACAATTTGGAGCTGATGTG ATAATGACATCAGAATCTTGCCAAAATGGTATGCAAGTTAATTGCATGTTATAACCATTTTTTTTTGTATATTATTATTTTGCAATGTTGCAGTCTTTGT TATGCTTAATAGGTACTGAGCGCTGCAATGAAGCCCTACAGAAGCTTGGGAAAAAATATGATGTTGTTGTCAACATTCAGGGGGATGAGCCTCTTATTGA ACCTGAAATAGTCGATGGTGTTGTCAAAGCTTTGCAGGCAGCTCCAGATGCAGTGTTCAGCACTGCAGTCACATCTTTAAAGCCTGAAGATGCTCATGAC CCAAATAGAGTGAAATGTGTGGTCGACAATCGTGGTTATGCCATCTATTTTTCACGAGGATTAATCCCATTCAACAAATCAGGGAAGGTTAATCAACAGT TCCCTTATTTGCTTCATCTTGGGATTCAGAGCTATGATGCAAAGTTTCTAAAGATATATCCGCATCTTCAGCCTACTCCATTACAACTTGAGGAAGATTT GGAGCAGCTTAAAGTCCTTGAAAATGGATATAAGATGAAGGTAATAAAAGTTGACCACGAGGCCCATGGCGTCGACACTCCTGAAGATGTTCAAAAGATA GAATCTCTTATGCGTGAGAGGAACTTGTCTTGAACTCTAGGGCAATGAAACAAGTGTAAGCTAACCATTAGTTCAATACATGACAGATAAAGATGGTCTG TAACTGTATTCATTTTTATAACTTTTTTGCTTGTTGCTTTCAACAACATAGCGGGGTGTTATGATTTATAATGAAATATTTTAGCATGGGTAGTAGGACT TGTTTTTCCTCCCCATTATTACTAGTGTTTGTATATGATAAAGAAGTGAGAATGCAAATTTAGTTAAAGTATATGAATTGTATCTTATCCTAGAAAAGGT TGAAGTAGGATGTGGATAATTTGTAATGACCTGCAGAGAAGTGTGCGATTGAACTATATCATGAATTAGTTGGTTTTATAATGAAGAAATTGTTGCTAG
• Tissue: pods
• Gene name: LI_gene_156323;
• Additional information: details;

Expression of Ll_transcript_442260

FPKM

• PAB: 0.2
• PNAB: 0.2
• PS1: 0.1
• PS2: 0.3
• PS3: 0.4
• PW1: 0.2
• PW2: 0.1
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_442260

• Blastp: 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial from Arabidopsis with 85.16% of identity
• Blastx: 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial from Arabidopsis with 77.49% of identity
• Eggnog: Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria (By similarity)(COG1212)
• Kegg: Link to kegg annotations (AT1G53000)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449157.1)
• Pfam: Cytidylyltransferase (PF02348.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;