| Id Trinity | TRINITY_DN47925_c0_g2_i6 |
|---|---|
| Name Transcript | Ll_transcript_423402 |
| Sequence | TGATTTTGTCATTGTTTTTGTTTGGATACATTAGAGGAGAATATATGTGTAGAGCAACTTTACTTTATTGGTTTGATTTATGCTGTTTTCTTATTTCAAT TGACCGAATCCTCATGTGGTGGAACAAGGCTGAAGAGTGTTATTGCATTTCAATAGCTAACGAGTAATGACCATTCACAGCAAGCAATAACATCTTTATT GTTTTTGTTTTTTTGGGTTGGTCTTTGCAACCAGGTCTAATTTATAGTTGCGTTTTATGCTGATCTTCAGATTCCATGATGTTGCTCAACTAAATAAGTC AAACAATTCCAGCCAGTCTAATGAGAACTCAAAGCTCAAGATTGCGATCATTGGCTTTGGCAACTTCGGTCAATTCCTTGCAAAAACCTTTATTCATCTC GGTCATGAAGTGCTAGCATACTCTCGATCTGACTACTCTGCCATGGCTCGGAAATTGAGAGTTTCTTATTTCAGTGATGCAGATGATCTTTGTGAACAGC ATCCAGAGGTGATTTTACTTTGCACTTCCATCCTTTCCACTGAGAAGGTTCTTAAATCATTGCCAGTGCAAAGACTGAAGAGAAGCACTTTGTTTGTTGA TGTACTTTCTGTCAAAGAATTTCCTAGAAACTTGTTTCTTCAACATTTACCACCTTATTTTGATATTCTCTGTACTCATCCTATGTTTGGGCCAGAGAGT GGAAAAAATGGGTGGAAGGGTCTTCCTTTTGTTTTTGATAAAGTCAGAGTCGTAAGAGATGAATCAAGAATATCACGGTGTGATCAGTTTCTTAACATTT TTGCTACCGAAGGGTGCCAAATGGTTGAAATGCCATGTGCTGAACATGATTGGCATGCAGCTGGATCTCAGTTCATTACACACACCACAGGAAGAATTTT AGAACGGCTGAAGTTGGAAGCAACACCAATCAACACCAAGGGCTATGAAACTTTGTTGAGTTTGATGGATAATACAGTTGGAGATAGTTTTGATCTGTAC TATGGTTTGTTCTTGTATAACTTAAATGCCATGGAGCAGCTTGAAAGATTGGATCAGGCTTTTGAATCACTGAAGAAACAGCTTTTTGGCCGTTTGCATA GAGTTTACCGAAAGCAAGTATTTGAAAATGAAGAACTTGTCCATGCTTTGCCGGAGAGGTCTTTTTTGCAAGAGATATCTGAAGATAGTAATGCTGTATC TTCTCTCACAGATACTGTGGACCCTAAATGAAGTTAGTTTCAAAGTATTCTTGCAAAAACATGGCAAGATGTATGAGCATTCAGCCAAGTAATCCACCTG ATGCTGGTCAATGTTGGTCCTCATAGTGCTGATTGGTGCTTTTATTTCATCCAGCTGTACATTACAGGATGAGAAAAAGATGTATGCACTGACAGTGTAT GAGTTTTATACACTGTCATTACATTATCAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_156666; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_423402
| Blastp | Arogenate dehydrogenase 1, chloroplastic from Arabidopsis with 77.53% of identity |
|---|---|
| Blastx | Arogenate dehydrogenase 1, chloroplastic from Arabidopsis with 79.45% of identity |
| Eggnog | prephenate dehydrogenase(COG0287) |
| Kegg | Link to kegg annotations (AT5G34930) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019463403.1) |
| Pfam | D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain (PF02826.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |