Ll_transcript_422598

• Id Trinity: TRINITY_DN47985_c1_g2_i1
• Name Transcript: Ll_transcript_422598
• Sequence: TCCTTCTCAACCTTCACCGTTGTGTTCAACAATGGAGGAGTCATTACTACTGTTAGGGTTCAAAGAAGAAAACGAAGACACAAATTCATCAACGTCTCTA AGATTGGTTCCTTGGCTTAACTGGAACGAATGGATTTTCGTTAAACATGCTCTCTTCTCCAATTCCACTTCCTCTATTGCCTCTGCTCTCAACAGAATAT CAGCATGGCGAAGTCGTGGTTCTTTGCCAATTACTGTTCAAATCACTGCTTCCATCATCGAAATTCAGCTCAAGGATCCTTACTTTCAAATGGTTGATCA TGCTTCTGATTCTGATGAGATACTCTCTATGTTATATTGCATGGCAATCACGAGGCTTGTGAATGGTGTCATTGAGAAGACACGTGTAAAAGAATTGGTG TCTATAGCTGTTGCTGCTGAAGCAATTGGTATTCCACGCACGCTGATCGATATTCGCCATGAGGCGTCGCATCGTGAACTTCCATCACTGAAGGTTGTTC GTACTGCCTCCATTAAGGCACTTGATTGGTTAAAATTTTATTATTGGGAGCCTCAAAGCAAAGCAATTCCTTTTCAAGGTGAAAGAAATGATAAGGTCAA AAAGGAAGTCAAATCTAAAATTCGTGAATTAGCTATCTGCGTGAAAGTCAAAGGAAATCCCCAGCCTAGTACTTCATTACTCAAGGGAAAACGGTTGAAG CATGGTGAATTGCTCTTAGGGCGTAATAAGCTTTTGAGTCTTACGCTTGGCAAGAGCCAGTCCTCACAGTCTGGAGGCTCTAAGAAACCAATTGCGAAGA TTTTGAAATCTGTTCTTCGGTTGTATTCCTCCTTCTCCTCAGAGATTGTATCTGTGTTGTTGGAGTATTTGCTGAAGGCTATGAGTTCTGCAGAGTTCAA AGAGAAAGCAGATGCTGCTTCTGTCGGTCTAACCATTCAGAGTGTTTTGGCTGATTGGAAGCCTGTCATACTCAAATTGTGGGACAAGGAACCAGAATTA CTTGTAAACCTTCTTAAGGAAGTTCTTGATATGATTGAGACTCGGGAAGATATGAAGTGTGATGGAGATAACCCGTGCACTGGGATTTCACACGCAAAGG CAGAGTTTTGCCGAAGTGATTATCTTTCTTCTTTGTTTGCTTGGCTTGTTGGGATTCTCAGCAAAGTTCCTTCTGCCACAGCAAATGTGCCAAAAAAAGT TTTGCTCGAGCTTCTTCATAAATGTCTTTTAATATCACAACTTTGCAACAAGCAGCTCATGGATTCAGCCCTTTATCTCGCTGAACTGGTGGGTGACAGG TTTTTGTTGGAGAGAGCTAAAAGGCTCTATCTCATTGGTTTGTCAAACTTAGACTATGCAGATGATAAAGCTTCCTCTGTGTTGACTACAAAGAATATTT TCCAATTTGAGGAATCCATACATGAAGCAGCTAAGAAGCTAGAGTTATTTAAACAACAGATATTGAAAAATAAAACACCAAGGGCTGTGGATTGTGAGAA TAAAAAATTACAGACTTGGTCTTTGGCAAAATCATGGAACCCATGTCCTATTGGCATGTTGCCCCGTGCAGTTGGTTCATCTGGTTTTCTCCCTGTTCTT GACCATGTTGATAACCAAAAACAGAATGTAGTATCAGAAAGGAGAGAGGATCAGAAATTGACCCAACATGGTACCAAGCGAGATGCCACTGAAGACCTTC AACTACTCGATAATTCATCTGTTAAGAAGATGAGGGATACCAAAGAATCTTGTGATTTAAATGATGTATTGCCGAGAGATGGAGTGAAGGGATGCCTCAT GGTAGCCGGAGTTTGGAAGAGAGTCGGGGAAGAAGAGCTACAAGCCATTCAGTCTTCTTTGAGGATTTTAGTTTAATTTGATAATTATTGCTTAGCTTGT CAAGATTCAATATGAGGTATGCTAGTCATTTATACGCATCTTATTTGATCTGATTTATAGAGCATTCACTGAAATTTTGTTTTAGAAGGGGTGTAGTTTG TATCTCCCCCACCCATATCTGATTTATAAAAGAAAAAGAGGAAATTAAATGAAAAACAATCCTATAGTTTAATTACCTGAATTAAATTCATGTAATCAGA ATAGTCTTTTATCTTTGTCAGTACCATTTTCATTGTGCTGAGTGCTTGTTCAATCAGTTATGCTAGGATGCCAATGCTGTATTGTGGTAAAGGAAAGTCC AGCAGGGGCGACCTGAGAACACGTGAGCTGGGAGGTATTCTGAAACCTCTCGGCAATCTTCATGTGTTCTCAGTACGACCCTGTAGAACCCCTCTACCTC TACATTTTTTTTGTAAAGTCTTTTGCCTAAACTGGAACGTTGAGCTTTCTCTCATGTTTTAACACGTAATGAATTTCTCATTTTGAT
• Tissue: pods
• Gene name: LI_gene_157234;
• Additional information: details;

Expression of Ll_transcript_422598

FPKM

• PAB: 4.2
• PNAB: 7.2
• PS1: 5.6
• PS2: 6.7
• PS3: 6.9
• PW1: 7.6
• PW2: 6.9
• PW3: 7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_422598

• Blastp: Ribosomal biogenesis protein LAS1L from Homo with 36% of identity
• Blastx: Ribosomal biogenesis protein LAS1L from Homo with 36% of identity
• Eggnog: LAS1-like (S. cerevisiae)(ENOG411230Q)
• Kegg: Link to kegg annotations (81887)
• CantataDB: -
• Mirbase: gma-MIR398c (MI0017847)
• Ncbi protein: Link to NCBI protein (XP_019460433.1)
• Pfam: Las1-like (PF04031.12)
• Rfam: MIR398 (RF00695)
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;