| Id Trinity | TRINITY_DN47997_c0_g3_i8 |
|---|---|
| Name Transcript | Ll_transcript_423718 |
| Sequence | AAAGAAAGAAGTGGATAAAGTGAGGATGAAGCATGTGGCAAAAGAACCACCTCTGCTGACATCTCTTGAATCTAAGACACAAGTAGCAACTCTGTTACAA CTTAGAAGCATTGTTTGGAATTGGAATGAACATCATGGCTTCACTCCTCTCTCCAACTACCATACTTAAACAACATAACCAAATGACAATTTGCTTCTCA CCATTGAAACCAACACTTCCAACATATAACAATAATGTTTCTTTCAAAAGTACTAGTAATTCTTCAAAGTGTCATGCTTTTTTTGATGACATATCCAATG GTTTATTGGAGAATGGTGTTATCCAATCAGGAATAGTGCAATTTGAGAGAGTAACTGAAGACTTATCAGACATGCAGAGATGGAGTTTTGTCATATTTGG TGGGCTCACATGGATTTACTTAACTGCAAGGCCAGGTGTTCTTGTTGGTGCAATTGATGCATACCTTCTTGCTCCTCTTCAACTTGGTTTGGATAATTTA TCTGGAAGAAGGAAAAACCTCAAGAGTAGTGATTTTGTTGTTGGAGATAAGCTTGGTGAAGGGTCATATGGTGTTGTTTATTCTGGTGTTTTACTACCAA AGAATGTGAATGTGAATGTGAATGTGAATGTGGAAGAAGAGAGGGTGCAGAAGAAGAGGGGAGGAAGAGGCAAGGCAGCAATAACAACACAGTTGGATGT CAAATCTAAGGATAAAGTCATTCTTAAAAAGGTTAAGGTTGGAATTCGAGGAGCTGAAGAATTTGGTGATTTTGAGGAATGGTTCAATTACAGGCTCTCT AGAGCAGCGCCCGAAACATGCGCTGACTTCCTTGGAACTTTCGTAGCTGATAAAACAAATTCACGGTTCACAAAAGGTGGAAAGTGGCTTGTTTGGAAGT TTGAGGGTGATCGCACTCTTGGTGATTACATGAAAGATCGTAACTTTCCTTCGAACTTGGAATCTGTCATGTTTGGACGTGTCTTGCAAGGTGTAGATTC TTCCAAGCGAAACGCATTGATCATCAAGCAAATAATGCGCCAGATAATTACATCTCTGAAGAAAATTCACAACACAGGAATTGTTCACAGGGATGTGAAG CCAGCTAACTTAGTGGTTACTAGAAGGGGACAGATTAAAATCATTGATTTTGGTGCAGCAACGGACCTGCGAATCGGAAAGAATTATGTTCCCAACCTTG CTCTTTTGGATCCTGACTACTGCCCCCCAGAACTATATGTACTTCCAGAAGAAACACCAAGTCCTCCACCAGCGCCAATTGCAGCTTTACTCTCACCAAT TTTATGGCAGGCTTTATTACTTATACCCTATTTATGTAGTAATAGACTAATAGTTAAGGTTCTCTTCTACAGGGTTATCAATTTTAGCAACATATATAAT GCTGGGGATTGGTAAACAAATTTATCAAATTAGTTACAGCAGTATATTGGTTTTGAAAATATCTATTCATGGAAGTATATAGTAAACAAGTTTATCAAGT TAGCTAAATATCTATTCATAGACAACATGATTCTTTGGTGAATTACAATTTAGGAACTCCGGATGAAGATTTTTCTAATCTAGGAACATTCGCTAAAAGA GTGGATAAAGTGTTGAACATATAGTGACTTTGTTAACCATCCTCCCCCTCTGTTCCGTGTAGTGTGTGTTTGGACTTTGGATGTGTTTGCTGACAAGCGA TTTTAAGATAATTTGTATCGTTAGGATTGCGTTAAAAGTATCTCAATCATATAGTAAATAAAAAAAAAGGGATGAAGTTATTTGTATGGATTAATAATAT TTTGTTGGTAGTTAGTTTTGAGGAGGTAAAATGAGAAAAATGTGTAGTTTCAAGATAATCTATATACATTTCCACAAGATGTGCTAAAGTGAAGTTATGT GATTGCTGCAGTTAAACAGTCCTGATTTGTTTGATATGTATTCGGCCGGCATTGTATTGCTGCAAATGGCGATACCGAACTTAAGGTCTTCTTCTGCTTT GAAGAGTTTCAATTCGGAAATAAAAACATGTGGTTATGATTTGAGAAAATGGAGGGATTATACTCGCCTCAGGCCGGACTTGCAAGTCCTCGATAGTGAA TCTGGTAGAGGGTGGGACTTAGCAACAAAGCTTATCTCTGAAAGAGGTTCCCTAAGAAGAGGACGTTTATCTGCCGCTGCCGCTTTGAGGCATCCTTACT TTCTTCTAGGTCAAGGTGATCAAGCTGCAGCAGTCATATCAAAATTAAGCTTAACAAGAAAATGAGCTGCTAAGAAATGTTGCCCATGCTTCCTTCTGAA AATCTGCTCTCCATGTTTGGTTTGCCAAAACATTTTTAATTTTATTTTCTGTTTATATTAATAATTTCAAAAAATGCCACCTTGTTACCATTTAGTTTTC TGTTTTCAACAATTTGTATAGTAAACTATGAAAGCAATTGTTTCCATTTTACTCATTTACCAATTTATTTTTGCTCTTTGTTTTGTAAAAACCATGTCAC TTTGGATTCATGTTCCCTGGTAATATTGCAAAACATTCATTTGATTCAACAGTGTCAGACAAGCCCACCTAACTTATGTATTGACAACTATCATCATTTA TGAGATTTTGCTCAAAATTTTCAGAGTCTTTGGGCTTCAAGACTGAATAATGGTGAAATTTTTCTACAAAATTTCAGGCACACAGTAAGCCTGAGGAAAT TTACATCTTATGGAAAAAAAAGCTATTGCTTCTGGATATGACATCAAACTAATACTGCAGTACTTAGTGGTCATAAGAGCTTTGCTCTCTTTCTACAAAA AATACCAGATGATTGGTAGGTCCTCACATCTTATAGCATAACTTTGGAGGTCCTATGGCACAAGATATAGATATAAGTGATGCTGCAGTCTTTTGACATT GTGATATGTAGTGTCTTACTTATTGGATGAATGTTGCATACTTACATTCAAGATGAGATTATGTATTCAATTCCATATGGAAGTGTCATTTGAGTTTAGA GTAATGTCCCTATAGAAAATGGTTCTTCTTATGGCTTTCAAAATGAGTTGTTTTCAAGTAGTCCTCAAAGCCTACAGGCTTATTTTTCCAATTGCCATAC AAATGTCAAAACATACAAAGCAAAAATACTATTTACAATAATACACACAGAATGGTATTTATCCCATCTCTTCACACTTTTCTTTGTAATATCATTTTCA AACTGAAGTTGATCACTCTTGTATCCCCTAAGGTAGAGACATGCATGTGTACATGGCCATAACATCATAGTTGGTAACTTCACACACATGGTGGTAGAGT TAGAGCTCATCGCGATAGAACACTTTTTGGAAGACATTTTTCTTCTTGCAACCCCAATGACATCTCTTAGAACACACTGAGTTGAATATGTCAAGCCTTG TGGATTGAAGGGATATCATGCTTG BLAST |
| Tissue | pods |
| Gene name | LI_gene_157345; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_423718
| Blastp | Serine/threonine-protein kinase STN8, chloroplastic from Arabidopsis with 64.14% of identity |
|---|---|
| Blastx | Serine/threonine-protein kinase STN8, chloroplastic from Arabidopsis with 62.03% of identity |
| Eggnog | Cyclin-Dependent Kinase(ENOG410XPP3) |
| Kegg | Link to kegg annotations (AT5G01920) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019464052.1) |
| Pfam | Protein tyrosine kinase (PF07714.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |