| Id Trinity | TRINITY_DN48001_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_327209 |
| Sequence | ATTATGTTTCTGCTATTACTGTGTTCTCGGTTACAGTGAAACTGAAGACATAGATGGTTCCTTAGCCCTTTGGATTTTTCTGTCACCCTTTCAACCTATG ATGCTATCTTAATTTTCTCAACTTAATACAGCTTTACCACATTTTCCTCTTTCCATGTTCTTTTTTCTTGACTTGGTCCTCTTCTCACACACACACATAT ACAGTGTTTAGTTTTTGCCACATTTCTTTTGAACATTGAAACTATGGCTATGCATTTTCTTCTGCTTCTTTTTGCAATGTCTATTGTTACTGCATCTGAT GAAGGTGAGTGAACAGTTTTAGTTCCATGCATAATCTTCTTTGCTGCAGTTTTCTCACCTTTAAAGTTACTTGTATTCTGAATCATCCTTTCCTCTCTGA TATCTAATATCTTCTTAAAATGGGTTTGTACTTTGTACTTTACTTTGTTCAGTGAGCAATGAAAAGCTTCATTTTTATTTGAACTGCGTGGGTTCCTCTT TAAGCCTTTACTTTCTTCCTCATCCTCTAGAAGGGGACTTCATATTATTAATTGCGGTTAGAGTATTCTGAGATTTATGATCTAGGGGGTAAACTTAATA GGAGTGGAATTTAACAATGTATAAAGGTATAGACCCAAACTCTCTCTAATATTATATGCTTTTCAATTTAATCCTCAAGAATAGTACATTCTGGCTGTTA GTGTTAATGAGATTTTTTTAATGTTGATGTTCAAAGAGTTATTAATCAATCAATCTCTTGTTTTCCCATTTTTCATTTCCTTTAGTCTCAAAGCAAGCAT TTTTCTACAATGTTGGTTTATTTTTTTCATGAGATACATGTTGGTTATTTTGATTGAGAGTAGAACTTCTCATAAACATTAAAGTGTAAACTAAAGTGGA AAAAAGAAGAGGGTAACTAAGCTGCATTAATTGGTTGGTGAATGCTAATGTGGTCCACCTGTAGTATTCAGATATATTGAATGGGGTAGGATAGATGAGA TCTATTTAATCATTTATTGCCTTTTTCCTCACTTATGGATATATGTGTAGCACTTTATGGTAGAGAAGTAATTTTGAAAATTAAAATACAACTGATAGTT AGCTCTGTTGGTAAAGTCTCTTTTGACTGAGATCAAATTTTGGTATCTAAGGTTTCCAATAACACTTTTTTTGAAAAGGAAATAAGCTTTCATTTATAGG GAATTATATACATTCTAGTTAAAACTTTGCAGGTCACACTACTTAAATCTTCTAAAGAAAGCAAAGCAACCATGTTTTCAAATACTTATATTGGATAGAA GGATATTTCAAGCCAACATAATCAAAATTTGATATAAGTTTCTGCATGCATATGCTTCCAAACTAACCTTGTTTTGTTTGTTCTTTGCAGAACCTTTTAT TGGAGTGAATGTTGGAACATTTCTCTCAGATATGCCTCATCCTACTCAAGTAGTGGCACTACTTAAAGCTCAGAAAATTCAACATGTTCGGTTGTATGAC GCTGACCAAGCTATGCTCATTGCACTTGCAAAGACAGGAATTCAAGTTTCGGTCTCTGTCCCTAATGAAGAGATCCTAGCAATTGGTCAATCAAATTCCA CCGCTGCTAACTGGGTTTCGCGCAACGTGGTAGCGCATTATCCAGCCACCAATATCATATCTATTTGCGTTGGTTCTGAGGTCGTAACTTCAATGCCTAA TGCAGCAAAAGTGCTTGTTAATGCACTTAAGTACATTCATTCAGCCCTGGTGGCAGCCAATCTTGATCACAAAATCAAAGTTTCGACACCCCTTTCATCT TCCATTATCCTTGATTCATTCCCACCTTCCCAAGCTTTCTTTAACCGCTCGCTGAATCCAGTCCTGGTCCCATTGCTCGATTTCTTGCAATCCACGGACT CTTATCTCATGCTCAATATATACCCTTACTATGACTATATGCAGTCCAATGGTGCAATTTCATTGGAATATGCACTCTTCAAACCTCTCCCTCCAAACAA AGAAGCTGTTGATTCTAATACACTTCTTCATTACTCCAATGTGTTTGATGCTGTGGTTGATGCAGCATACTTTGCCATGTCTTTTATAAATTACACTAAC ATTCCTATAGTAGTGACAGAAACAGGATGGCCCTCAAAAGGTGACCCTAATGAGCCTGATGCCACATTAGACAATGCCAATACTTATAATAGCAATTTGA TCAAACATGTGCTTAACACAACTGGAACTCCAAAAAATCCCGGAATCGCAACTAGTACTTACATCTACGAGCTTTACAACGAGGATATGAAGCAAGGGCC GTTGTCAGAGAAGAATTGGGGATTGTTTGATGAAAATGGTGTGCCTATTTACATTTTACACTTGACAGGATCAGGTGCAGTGTTAGCAAATGATACCACT AATCAAACATACTGCATTGCGAAGGATGGTGCAGATCCGAAGATGCTGCAGGCTGGAATAGATTGGGCATGTGGAGCTGGCAAGGTGGATTGCTCTCCAT TGCTGCAGGGACAACCATGCTATGAACCAGACAATGTAATTGCACATGCAAATTATGCTTTTGACACTTATTATCATCAGATGGGAAAGTCTCCTGAGTC ATGTGACTTCAATGAAATGGCTACAATATCCACTACCGATCCAAGTCATGGTTCCTGTGTATTTCTGGGAAGCCTTGGAAATAATGGCACCTTCTCTAAC ATCACTGGAGCATCACTAAATTCGACCAATTCATATTCTTCTGCCTGCAATCTCCACAGCTTTGATTTGAGAGGCCTTCTAATGGTCATAGGGTTGCTAA TATGGGGAGTGGTTTTGCCGTAAAGTTTTATACTGTTAAATGTATTTTAGTTATTAGCAAAGGGTAGTCTTGTCTTTTGTATTTTCCTAACTTCCTATAT GTATCGGCCCTTTGGCCTTATCTCCATTATCAATTTCATATTACATTCCTCTCCCTTCTCTCTTCTTCTTCTCCTCTCCCTTCTCTCTTCTGTTCATGCT TCTGGGTTCCATCATCTTTTCTTCTTCTTCGCAGTGGTAGACCAGCTTCTACAGTTCGCAGATCGCAATTTAGCCGAGCGAATTTGTTAGGTTTTCTGTT TCTCTTTCCCTTTGAATTTCGATTTCCCTGCTGTTGTGCTTGTTAGTTATGGCAACTGAAAGAGATGATTCTTTGCAATCCATTAGTGTGCAACTAAATG GATCATCCAATTATGCATATTGGAGTTATGTGATGAGAAATTTTCTGATTGGTAAACGAATGTGGGGATATATTTCTGGAACTTTTGTTAAACCTGCGAA TAGTGCTACTGAAAATTATGCAAAGGAGTTAGACACTTGGCAAGAGAACAACTCGAAAATTATTACTTGGATTAATAATTCTGTTTTTTTCAACTTGCAA AATATGATTCAACATCTCAGATTTGGGAGCAACTTAAACGATTGTATGTGCAGTCCAATTTTGCAAAACAATGAAGACTCAAACAATAAAATGCAAAATA GGTTGGGTAATTGATGTCTGAATAATGATTAGTACTAACCTTCCCTCATTCTTCCACTGTGTCATCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_157353; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_327209
| Blastp | Glucan endo-1,3-beta-glucosidase 2 from Arabidopsis with 71% of identity |
|---|---|
| Blastx | Glucan endo-1,3-beta-glucosidase 2 from Arabidopsis with 71.1% of identity |
| Eggnog | glucan endo-1-3-beta-glucosidase(ENOG410ZF4V) |
| Kegg | Link to kegg annotations (AT1G66250) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019439487.1) |
| Pfam | Glycosyl hydrolases family 17 (PF00332.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |