Ll_transcript_327216

• Id Trinity: TRINITY_DN48001_c0_g3_i5
• Name Transcript: Ll_transcript_327216
• Sequence: GGTTGAAGTGATTGTATGAAAAGTCTTATCATGTTCAACCATGAAGTGTTTCTCTCTATCTCTATGTCTTCTCCTCTGTCACTGTTTTCAAAGTGTGTCG TCTCAAAATGCATCTAAGAGTAAAAATCTACAACAAGCTACTATTCCACCAAGAGGTTGGAATTCATATGATTCATTTAGTTGGATAATATCTGAACAAG AATTCTTGCAGAGTGCTGAAATTGTTTCTCAGAAACTCCATGATCACGGATACGAGTATGTTGTGGTGGATTACCTCTGGTATAGAATGAAAGTTCCGGG TGCATCTCATTATTCGCTCGGATTCGATGTGATTGATGAATGGGGAAGGATGGTTCCAGACCCAGGGAGGTGGCCTTCTTCCAAAGATGGTAAAGGGTTT GCTGAAGTAGCTGATAAAGTACATAGCTTGGGTTTAAAGTTCGGTATTCATGTTATGAGAGGGATAAGCACACAAGCTGTTAATGCAAACACCCCTATCC TAGATATAACAAAGGGTGGTACTTATCAAGAATTTGGTCGAGTGTGGCGTGCGAAAGATATAGCGATCCCAGAAAGGGCTTGTGCATGGATGCCTGACGG TTTCATGAGCGTAAATACAAACTTGGGAGCTGGGAAAGCTTTTTTGAGATCCCTTTATGTGCAGTATGCAGCATGGGGTGTTGATTTTGTTAAACATGAC TGTGTATTTGGCGATGACTTGGATCTAAATGAAATAACCTATGTATCAGAGCTTCTCCGGGAGTTTGATCGCCCAATTGTATATTCTTTGTCTCCTGGAA CTAGCGTGACACCGGCTATGGCCAAGGAAGTCAGTGGACTGGTCAACCTGTATCGTATAACAGCAGATGATTGGGATAACTGGGGGGATGTCAAAGCTCA TTTTGATGTATCAAGGGATTTTTCAACTGCTAATATGATAGGAGCAAAAGGTTTAAAGGGGAATTCGTGGCCTGATTTGGACATGCTACCATTTGGATGG CTAACTGATCCCGGTTCAAATCAAGGTCCGCACAGGAATACTAAACTCAATCTAGTAGAGAAAACGACACAGATGACTTTGTGGTCAATGGTAAAGTCTC CACTTATGTACGGGGGAGATGTGCGGAAAATTGATAATACGACATATGATCTTATTACGAATCCAACTCTTCTGGAGATTAATTCTTTTAGCTCAAATAA TATGGAGTTTCCTTATATCACAAGCTTGAGGAGTGAAGATCCTCTTTGGTCGCCGATGAGAAGATCCAATGAAGAAATGAAAACAACATATACACATTCG TTAAGTTTCACTAGCTGTGCAGAGTCAAAGGCAAGTGGTTGGAGTAGTGATAATATTGACCAACATGTTGAAAGATTTTGTTGGCAAAGGAGTTTAGGAA ACAAGAATCTTGACCCTTTCTGTGTACACAAGAGAGAAATCCGCTTCACAATACATCAGGAGAGTATGTTTCAAAAGAATCATAGAGGAGAACATCATTT AGTTGCGACCGATAATGATAAACTTTGCTTGAACGCTTCTCCAAAACGAAAGCTTACTTCTCAAGAGTCTAGGAGAGGTTCATTTTCTCCTTGCAGATGG GATTCAAATCAGATGTGGAAGCTGAACTCTAATGGCACCCTGGTAAATAGTTATTCTGGCCAATGTGCAACAATTGAGGCTACCAAAGGTGAAATTTGTA AATATGCACCATTTTCTAGAATGATTAGGATCCATGCAGCTTATCGAGGTTATTTTCTTTTTTACTTTGTAAAGTTATCATAAATAATCAAGTTGGTCAT TCATGCAGCTACTATTAATGTCGGTGGTTTTCGCTCTTTGATCGCAACCGGAGGAAAAGGTCTGTTGCTACCAAACAACCTTAATAGACAAATCTTTGAG GGTTTTCTTATTTTCTGCAACTTCAAAGTTCAAAACATTTATACAAAAGTTTGACCCTTGCTATTTAACTCAGCCTTATTAAAAGCCCACCTCACTGAAA AGACTCAGTTGTTGTAGTAGTTATACGGCAAATAAAATGTTATGATTCCTACATAAAGTAAATACGGAAGGTCAATATGATACTGAAGCCATGAGATTCG ACGATCTAATAGACTGGACTTTCAGGTTAGGCTCTTCTCATCACGAGGTGGGAGAGACTTATGGCCTAAGTACCAACTTGAGCTTCTTTATTTACTCAAC GTGGTGCTCGTAATATTACCACCCCTATAAGAGTCAATGTTAATGCCAATTTCACTCTATTGACACCTACCGGTGGCAATCATTCTCCTTTGGGTTACCC TCATCTATCAACATTCGATATTATACCTTAATCCATAGGCAGGCCTTTACCCGTTTCTCAATGAAAGCACCAATTGTTATAACCTCCCTCCTAAAGTCAA AGGAGAAAGACTCCAGATGATTCCACATTTCACCAAGATTGTCACTTAATCCGAACTACCATGGCTTAGTTATACAGCGCACTTATTAACCAACTAACAC TACAACTCCCCTAACTAATTACAATCCATATCACTAAACCAAACTACATTTTGTGTATATTTGTTGCTGTTGGTCTGTGTCTCTCTCCATTGAGTATGAA CTATCATGCTACAACAAAGAACTCTGTGAAGTTATTATTTTTTGACCCCTTTGTGTTATGTCTTATGCAGGAGAAATTTATGTTGCTTTCTTCAATCTAA GTGAACAGGAAAATGTGATATCTGCACAGATATCAGACCTGGCTAAGGTTCTTCCTGGCAGAGACTTCAATTCCTGTGAGGCCAGTGAAGTGTGGAGTGG AGTTGACATAGCAACGATGCATGCGACATTATCGACACATGGGACATTATCGGCGACAGTGACAGAGCATGGAAGTGCACTATTTGTTCTAAATTGCAAC TAGTTTGGCCCTTCATAAAGAAAGAAGAAAAGAAAAATGGCATGTCAATGCTATGTTTGGATTGATGAAAGTGTGATGAAACCTGTAAAGTGAAGACCCT TCTATATACCCTTTTGTTCTCTTTACATTCCACTATATTTCATTTCATTGCACCCTTCTAATGATAGCATTGCTATGCTTATGAGTTATGACAATAAGTT TTTTTTACCAATGTTGTGGTATAAGTGTAATTACATAAGAAATCAATTAAAGCCATTTTATATAAAATTATGGGTGGATTAGTTCATAAAATGAAGCACC TAGCAACATTTGACTCATGTCTATTCAGTAATTTATATGATTCTTAAGTTAGGTAATGGTAGTTGTGGG
• Tissue: pods
• Gene name: LI_gene_157355;
• Additional information: details;

Expression of Ll_transcript_327216

FPKM

• PAB: 0.3
• PNAB: 0.2
• PS1: 0.1
• PS2: 0.3
• PS3: 0.2
• PW1: 0.2
• PW2: 0.4
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_327216

• Blastp: Alpha-galactosidase from Coffea with 25.79% of identity
• Blastx: Alpha-galactosidase from Coffea with 25.79% of identity
• Eggnog: -
• Kegg: -
• CantataDB: Link to cantataDB annotations (CNT0001220)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019438348.1)
• Pfam: Alpha galactosidase A (PF16499.4)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;