| Id Trinity | TRINITY_DN48001_c0_g3_i9 |
|---|---|
| Name Transcript | Ll_transcript_327222 |
| Sequence | ATTTGGTATAAAAAGCAGTTAGAGATACTTATGGTCATTGTTTCAGAGGTGTTATATCTCTTTCTTCTCATCACTAACTAAGAATGAGTTTGAGTCGTAC ACACAAAAAATTAAAAAAAGAAAAAGAAATTATATTTTTAGATTTAGTAGTATTTAACTGTGGGAACTTTTGTTCGGTGGAACAGCTGTGGAAGCAATAA TGAAGTGTTTCTCAGTGCCCTTCGTCTCTCTCTGGCTTCTCCTTTCTCTCTGTATTCACAGTGTTTCATCACAGAATATATCTCTAAGTGCCCTGCAGCA AGCTAGCTTCCCGCCAAGAGGTTGGAATTCCTATGATTCCTTCTGCTGGACAATTTCTGAACAAGAATTCTTGGAGAATGCTGAACTAGTTTCTCAGCGT CTCCGTGCTCACGGATACGAGTATGTTGTGGTGGATTACCTCTGGTATAGAAAGAAAGTCAATGGTGCTTATCCTGATTCTCTTGGATTCGATGTGATTG ATGAATGGGGAAGGATGGTCCCTGATCCAGGGAGGTGGCCTTCTTCCGCAGGTGGGAAGGGGTTCACTGAGGTAGCTAATAAAGTACATAGAATGGGTTT GAAGTTTGGGATTCATGTTATGAGAGGGATAAGCACACAAGCCGTCAATGCAAACACCGCTATCCTAGATACAACAAAGGGAGGTGCTTATCAAGAATCT GGTCGAGTGTGGCATGCAAAAGACATAGCAATTCCGGAAAGGGCTTGTGCATGGATGCCTCATGGTTTCATGAGTGTAAATACAAAGTTGGGAGCTGGAA AAGCTTTCTTGAGGTCCCTTTATGAGCAGTATGCTGAGTGGGGCGTTGATTTTGTGAAACATGACTGCGTGTTTGGCGATGACTTGGATTTAAATGAAAT AACATATGTATCAGAGGTTCTCAGGAATCACCCCATTGTGTATTCTCTGTCTCCTGGAACCAGTGTGACACCAGCCATGGCCAAGGATGTCAGTTCACTA GTCAACCTGTATCGTATAACAGGAGATGACTGGGATACTTGGGATGATGTCAAAGCTCACTTTGGTGTAACAAGGGATTTTGCTAATGCTAATATGATAG GAGGAAAAGGTTTAAAAGGATTCTCCTGGCCTGATTTGGACATGCTACCATTTGGATGGCTAACTGATCCCGGTTCAAATCAAGGTCCGCACAGGAATAC TAAACTCAATCTAGTAGAGAAAACGACACAGATGACTTTGTGGTCAATGGTAAAGTCTCCACTTATGTACGGGGGAGATGTGCGGAAAATTGATAATACG ACATATGATCTTATTACGAATCCAACTCTTCTGGAGATTAATTCTTTTAGCTCAAATAATATGGAGTTTCCTTATATCACAAGCTTGAGGAGTGAAGATC CTCTTTGGTCGCCGATGAGAAGATCCAATGAAGAAATGAAAACAACATATACACATTCGTTAAGTTTCACTAGCTGTGCAGAGTCAAAGGCAAGTGGTTG GAGTAGTGATAATATTGACCAACATGTTGAAAGATTTTGTTGGCAAAGGAGTTTAGGAAACAAGAATCTTGACCCTTTCTGTGTACACAAGAGAGAAATC CGCTTCACAATACATCAGGAGAGTATGTTTCAAAAGAATCATAGAGGAGAACATCATTTAGTTGCGACCGATAATGATAAACTTTGCTTGAACGCTTCTC CAAAACGAAAGCTTACTTCTCAAGAGTCTAGGAGAGGTTCATTTTCTCCTTGCAGATGGGATTCAAATCAGATGTGGAAGCTGAACTCTAATGGCACCCT GGTAAATAGTTATTCTGGCCAATGTGCAACAATTGAGGCTACCAAAGCTACTATTAATGTCGGTGGTTTTCGCTCTTTGATCGCAACCGGAGGAAAAGGA GAAATTTATGTTGCTTTCTTCAATCTAAGTGAACAGGAAAATGTGATATCTGCACAGATATCAGACCTGGCTAAGGTTCTTCCTGGCAGAGACTTCAATT CCTGTGAGGCCAGTGAAGTGTGGAGTGGAGTTGACATAGCAACGATGCATGCGACATTATCGACACATGGGACATTATCGGCGACAGTGACAGAGCATGG AAGTGCACTATTTGTTCTAAATTGCAACTAGTTTGGCCCTTCATAAAGAAAGAAGAAAAGAAAAATGGCATGTCAATGCTATGTTTGGATTGATGAAAGT GTGATGAAACCTGTAAAGTGAAGACCCTTCTATATACCCTTTTGTTCTCTTTACATTCCACTATATTTCATTTCATTGCACCCTTCTAATGATAGCATTG CTATGCTTATGAGTTATGACAATAAGTTTTTTTTACCAATGTTGTGGTATAAGTGTAATTACATAAGAAATCAATTAAAGCCATTTTATATAAAATTATG GGTGGATTAGTTCATAAAATGAAGCACCTAGCAACATTTGACTCATGTCTATTCAGTAATTTATATGATTCTTAAGTTAGGTAATGGTAGTTGTGGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_157355; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_327222
| Blastp | Alpha-galactosidase from Coffea with 25.21% of identity |
|---|---|
| Blastx | Alpha-galactosidase from Coffea with 25.21% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | Link to cantataDB annotations (CNT0001220) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019438348.1) |
| Pfam | Alpha galactosidase A (PF16499.4) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |