| Id Trinity | TRINITY_DN48028_c1_g2_i5 |
|---|---|
| Name Transcript | Ll_transcript_327285 |
| Sequence | GACTCACTTGCTGTCTACAAGTATAACTTTTGCAGCTACTCTCATACTCACCTCATTCTCCTTCATTGAACAAAACCAAACTTCAAATTCTCAGCCTCAC TTCACTTAACCAAACTAGACCTTTATTACAGTTCCATATTTACCAAAATCAATATAATATATCCAAATATTCCACATACATATATACCTGTTTTCTTCTT CATTCAAATTAAACCATACTTTATTTCATCAGTAATTGGATGTGTTTGGTTTTATTTTGCCATGAGTTCTACATCTCTTGAAGCTTTGCTAGCTTCAAAT TCTTGAAATAGTGTTATATAGTCTTACACTTACCAAGACACAACTTTGTTACATTAATATCACTCTATTTTTAATTCCAACTGATTTTTCTTGAAATAGT TCTATATGGATTACTTGAAGGAACTAGAAGGAAAAAGTGTTCATGATTGTTATCATCACAAGATAAAGGGCATGGATAAAATGGCTAGTACTCCTCCAAT AAGGGTCCAGGGACCTATAATTGTGGGTGCTGGTCCCTCTGGTGTAGCAGTAGCAGCATTGCTTAAACAAAAAGCTATTCCAAGTTTAATCCTTGAAAAA GCTGATTGTTTAGCTTCTATGTGGCAGCTTAAGACTTATGATCGCCTTTGTCTTCATCTTCCAAAGCAATTTTGTCAACTCCCTCTCATGCCATTTCCTA AAACCTTCCCTTCTTATCCAACCAAGCAACACTTTTTGACCTACTTGAAAACCTATGCTGAAAAATTTGATGTAAAACCAGCTTTTAGTACTGTAGTAGT TAGTGCTGAATTTGATCATAGGAGTGGATTTTGGAGGGTAAAGACTAAGGGAATGAAGAAAAAGGAAGAGGTGGAATATGTTTGTCAATGGCTTATAGTA GCTACTGGAGAGAATGCTGAAGAAGTAGTGCCTCAAATTGAAGGAATGGATGAATTTGAAGGGACTATATTACATAGTAGCTTGTATAAGAGGGGTAGCA TGTTTGGTGGGAAGAATGTTTTGGTAGTAGGGTGTGGGAATTCAGGCATGGAGGTTTGTTTGGATCTTTGCAACCATAATGCTCACGCATCCCTAGTGGT TAGAGACACCGTGCATATCTTGCCACAACAAATGCTTGGGAAATCAACTTTTGGTTTATCTATGTGTTTGTTAAAGTGTTTCCCTATACGTTTTGTTGAT CAATGTTTACTTGTAATGTCACATTTCATGTTTGGGGACACTTCTCAATTTGGACTTAATCGTCCTAAACTTGGACCTCTAGAGCTTAAGAACTTGAATG GCAAAACACCAGTTTTGGATGTTGGGACACTTGCTCAAATTAGAACTGGAAAAATTAAGGTTTGCCGGGGAATTAAACGAGTAGCACAGCACACAGTGGA ATTTGTTGATGGAAAAGTAGAAAACTTTGATGCCATCATTCTAGCAACTGGTTACAAAAGCAATGTACCCTCTTGGTTAAAGGACACTAACATGTTTAGT GAGAAAGATGGGTTACCTAAGAAGCCATTCCCAAATGGATGGAAAGGTGAAAATGGATTATATGCTGTGGGTTTCACTAAAAGGGGCCTCCTTGGTGCAT CTATTGATGCAAAGAGGATTGCTGAAGATATTGTACACAGCTAGAAAGTTGTTCAGGAATCCATACATGTATTGGAATTCACTTGCATCATGTGTGTGAG AAATATACACAAATGTTTTAGGCTTAGAAAAAGGAAAAGGATGACATGGCCTCTCTCATTTGAGTACAATTAGGGCAAAAGAAGAAAATTAGATTTGTTT TGTGTGTACTTTTTTAGTTTGGCTCGGTTTAAATTAAGAGTTTAAAATATGTACATTGACAGTGTAAAGTTTTTTACACTGTCGCCACATCATTCACCGT TGATTTGTATTAATTTTATTTGAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_157579; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_327285
| Blastp | Indole-3-pyruvate monooxygenase YUCCA2 from Arabidopsis with 65.28% of identity |
|---|---|
| Blastx | Indole-3-pyruvate monooxygenase YUCCA2 from Arabidopsis with 65.28% of identity |
| Eggnog | Monooxygenase(COG2072) |
| Kegg | Link to kegg annotations (AT4G13260) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019436640.1) |
| Pfam | Pyridine nucleotide-disulphide oxidoreductase (PF13738.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |