Ll_transcript_326940

• Id Trinity: TRINITY_DN48065_c3_g1_i5
• Name Transcript: Ll_transcript_326940
• Sequence: ATTTCTTCGGCCTCTTACTTTAGTTCTCTACTCTCTTTTCATAGAATGTTACCCACCACTAGTTTATATGGCCAAAAGATGAACACACATACATTAACAC TATCCGTTCATAAACTGTTGATCTACTATCAATAATCTCTGTATTGAAACATCAGCGTTCATGGCTACAACAACCTCATCTTTTGTCTTTCTGAAGTCTC TTATACCTTCGCCACAGCCTTCTCATACTGCTAAACTATCCATGCACAATGTTCCTTGTTTTCAATATGGAATTCAAACACGCAGAACCAAAGGAATCAA AGCTCAATACGGTTTTAATATTAATGTCCGAAAAGAACATGTTGTTATTGTAGGTGCTGGGATTGCAGGCCTTGCCACTGCTCTTTCCCTTCACAGGCTT GGAGTTGGGTCCCTAGTACTAGAGCAGGCAGAGTCACTTCGAACCAGTGGAACTTCACTCACCCTTTTCAAAAATGGGTGGAGGGTACTTGATGCAATCG GTGTAGCCAATGATCTCAGAACTCAATTCTTAGAAATTCAAGGGTACCTACATCATTTTTTTTAACAATTAATAAATGGGCAAAAACTTATGTATTGTTA ATTAGATACATGTGGTAATGTTCTTCTATACAAGTTCAACTTCTTTTAATTGATGAACTGTTAGCACTTGTTGGAAAACAAAAACAATACTATATACACC ATAAAAAACATGTAAGTTCTGGTTTGTGTAACTTGTTCAATGCCTATATCAGCTGAGCTTGAGATGGTTCATAATATCAGCTGTACAGGATGGTGATCAA GTCCGTGGATGGGAGGGAATTGCGCGACTTCACTTTCAAAGAAGAGGATGAAAGCCAGGAGGTTCGTGCAGTGGAGAGGAGAGTACTTTTAGAAACTTTA GCTGGCCAGCTCCCCAAGGATACCATTCAATTTTCTTCAAAGGTAGCGAAGATTGAAACAAGTCCGAACGGGGAGAGCATGTTGGAACTTACAGATGGGT CTCAGTTGCTTGCAAAGATTGTAATTGGGTGCGATGGGATTCGATCACCAATAGCCAGGTGGATGGGGTTTCCTGAGCCAAAGTATGTTGGTCATTGTGC TTACCGTGGACTTGCCTCTTACCCAGATGGGCAGCCTTATGGACCAAGAGTGAATTACATCTATGGAAGAGGGTTGCGCGCTGGATATGTTCCTGTTTCT CCAACCAAAGTTTACTGGTTTATCTGCTTCAACAGTACATCACCAGGTCCTTAATAAAAACTCCACACATCACTTAACTTAATAGGCATCAGCATCTTTG TTATTTTGACTAGATATGCTGGTAGATATATAATACATTCAGTCAAGAGTTATCACCTAGTAGCTTAAGCTTTTGAAGGTGTTAGTTGATAATATGATAT CAGACAACAAAGGCACACAAATATCATTTTCTCTCTAGCATATCATGTGCAATTAAGTTATTTTGACCAAATATGTTGTTAGAGATACAATAAAGTCATT AAACTGTCTTCACAAAATAACTTAAGCTTTTGCACACAAATGACTTTATTATATCTCTAACACATGCCATCTACTTTTGTGAGAGTTCTTATGAAATACG GTTATGAACTTATGAGTTATGACCAACGCAGGTTCAAAAATAACTGATTCATCGCTGCGCAAGAAACTAGCCAAGGAACTAATCAGGAACTGGCCTTCAG AGCTTTTGAACATAGTGGACTCTACACCAGATGACACAGTGATTAGGACTCCACTGGTAGATCGTTGGCTTTGGCCAACCATAACTCCACCTGCTTCTGC TGGTAGTGTTGTGCTGGTCGGAGATGCGTGGCACCCAATGACTCCCAATCTCGGTCAAGGTGCTTGTTGTGCACTTGAGGATGCTGTGGTTCTTGCTAAA AAACTTGCAGGAGCCATCAAGTCTGAAGACCCTTCTGTTGAAGAAGCTTTAAGGTCATATGGCACTGAAAGATGGTCTCGCGTATTTCCACTGAGCATAC GTGCAAACCTTGTGGGTTCCCTTTTGCAGTGGGAGAACCCATTGGTGTGTTCTGTGAGAAACAACATTGTCATACCTAAGGTAGTCAGGCTTGGGCCATT GCTGGAGCATACAAATTTCACTTGTGAAAGTCTATAAAGCAAAAAGAAAAGCAGATTATTTTGTCAAGTGATGAGGAAATTCATTTCTTCTCAATACACC TTATACTGCATTTAATCATTGTAAAGATAAACACTTGTTCTCATTACTATTGCAATAGGTTGCTTGGTAAAACCAAGTATTCATGTTGTCTATGTTCATT GGTTTGTGGGAAATAATAGCTCATTGCCATCGACCAGTTGGGTTTATTCAAGTCTGAAATCTCACATTGGACATGTGGGAAGAGTGAAAGAGTTTATAAG TGGGAAAGGCCCATGAAACAAATATCTTAAGATTTTAGTTCAAGACGTGGTGTCTCACTT
• Tissue: pods
• Gene name: LI_gene_157893;
• Additional information: details;

Expression of Ll_transcript_326940

FPKM

• PAB: 0.2
• PNAB: 1.6
• PS1: 0.2
• PS2: 0.1
• PS3: 0.2
• PW1: 0.2
• PW2: 0.4
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_326940

• Blastp: Monooxygenase 2 from Arabidopsis with 31.07% of identity
• Blastx: Monooxygenase 3 from Arabidopsis with 42.42% of identity
• Eggnog: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen(COG0654)
• Kegg: Link to kegg annotations (AT4G38540)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445032.1)
• Pfam: Squalene epoxidase (PF08491.9)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;