Id Trinity | TRINITY_DN48070_c0_g6_i3 |
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Name Transcript | Ll_transcript_326486 |
Sequence | AGAAAACCAAAAGGAGTTACGGGTTCTTTGGACCTTGAAAGTTGAAACCCAAATGGGATTTCAAATCCCTAACATTCTTCTTAATTCTCATCCCATTTTC ACCTTCTCCTCTTTAATGTCACAGCGGCGATCACGACGGCGATGCCGTCTCTTCTTCTTTCACGGCGGATCTTCTTCTCCAGCAACGGTGACGACGAAGC TTCCTGGTGGTGTCGAGGAGAGTGAACCGCGGCGATTCGCAGTGGGTCTCGCTGGTGGAACCACCCATTCTTGCAGCCGTTTGAAAAACCGAAGATAAGA TATGCAGAAACCAACAGATTCACTCACACAATGTATTCCCTATCTTCCAAATGAAATGCACATTGGAGAGTGCTAGTGTTGATGTTTGGACATTGATTGA CGCTGCACTCGTTGTTGCTTCCATCGACTACGCCGACGAATTCAAACGCCGTAGAGAAGGAATCGTGGAGCGCATTTACACAACCATGTCATCTTCTCCA CCGTGTCGGAATCGCGTAGCCAATAACAATGCAGAAATCGAGAAACATGTAGAGGAAGAGTTGAATCCTCGTGGAGGGTTGTTTAATGATGAGAAGAAGA AGAAGAATAAGAATATTCTAGAGATTAAGCAACAACTTGAATACACTGACCAGTCCGAAGAAACCTTGGTGGAGTTGCTACATAATCTTGATGACATTGA TGTTACATTTCAAGCATTAAAGGACACTAACATTGGGAGGCATGTGAGTAAGTTGGGGAAACATTCCTCTAATGATATTAGGAGATTGGCAAAGCTTCTT ATCAGGTTTTGGAAACAACCCATGGTTCTTTTTTAGTAAAAATAAAAGAAGACTGAATTTTGATTATTATTGAGTTCAGTTGGTGAAGTTTGCACAAGAT TAAATTTTTTATTGTATTATGATGATAAGAAATAAATAAGAATGTTATAGTGTAAAATTTCTATGATGTTAAAAAATGTTGTGGAAGTGATATAACTTGA CTGAATTTGACTATTTTGTACTACAGGAAGTGGAAAGGAGTTGTAGATGAATGGGTAAAGTTAGGAGAAGCAGTTACTAATGTCATGGCATCTGATGAAG AATCTTGTCAGCAGAAAACCCCACAGAATGACCATCAACAGAGTCTTGCTTTTGTATGCTCAACAAATCCACCAAATGGGAATTCAGGGTCAGATGTAGA ATTAAAATCGAAATCTATTTCTTACAAAGTAGCTCTACCAAAATCAGCAGCACCTGCACCATTATCACTTCCAACTTCCACTCCTCAAAATAGACAAAGG GAAAGCAAATTAGACTCTGAAAGATTTGCTTATGCAAGAAAACGGCTCCAAGAGAACTATAAAGAAATTGCAAACGCTAAAAAGCAGAAAATGATTCAAG TGATGGAACTCCACGAGTTACCTAAACCCAATAACAAGAATGTCTTCTTTGCAAAGAAACAACAACGTTTGCATGGAAGGTACCGGTGAAAGCACATACC AGCAAGTTTAATATTAAAAGGTTTCTATGAGGAAAGAAACCTTATAACCCCTTTCATTTTTTAATCCCCAACATAGGAACCCTTTTGGTTTTTCATTCAT TTCATTAAAAATGACAACATCAAAGTCAATAATATTTACTTGTGACTTTTTGACAATTTAGTGAGCAGTAACAATTGTTTTAATTGCTTAATATTCAAAA TTCATAATCACâBLAST |
Tissue | pods |
Gene name | LI_gene_157961; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_326486
Blastp | Probable mediator of RNA polymerase II transcription subunit 26c from Arabidopsis with 43.81% of identity |
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Blastx | Probable mediator of RNA polymerase II transcription subunit 26c from Arabidopsis with 43.3% of identity |
Eggnog | Transcription elongation(ENOG411201A) |
Kegg | Link to kegg annotations (AT5G09850) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019431646.1) |
Pfam | TFIIS helical bundle-like domain (PF08711.10) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |