| Id Trinity | TRINITY_DN48077_c2_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_328314 |
| Sequence | TTCAAAGTTATCATGGTTGAAGGGAAAGAAACGGTGTGTCTTTCATAAACATATAGTTCTCCTGAATTTATCCTTTAGTCTGCATGCTTGATTGCATATC ACTCTTATGTCTTAACCAAATTTGGTTCATTGTGTTATTTATCTTTGTGCTGTATTTTTCATGAATAGAGTGAATATTTTGATGCTGGCGCTAGATTAGA ACTATTTGACCTTATGAACCTGTACTTTTTTTTGCGTAGTGACATCTATGGGTATTCTTTATATTGATTCTTTCACTTTAGCATCTAGTGTTTATAAGAG TTGAATAATACTGGCCAACTTATTAGTATTTTGCAACTTTGAGTTTTGACATATATGACAGTACAGCAGCAATTGCATTTTATCCTTCCAAACTTGTAGA CCTGGAAGACTTGCACAGCAGAAAACAAAATACTTCGCAAATTTTTACATGTTCGATGTTCATATATGAAAATGATGGTCCAATTAACAAATGGGAGGGG TGGCCTGTCCAGCATACCTATACACGGTATAGTCCCTTTAAAATGCCTTCAGGGGTGGTTCAGCAGATAAATAGGATTATGAGGACTTTCTTATGGTATG GTCTGTGTTGGGGTATTAGCGAAGCCACTCACACTTATTGAATATCATATCAAAAGAAGAACTTATAATATAGGTGATTGCTGTGTGGTGTTAGATCAGA AAGGTGGCCACATCTAGTTCTGAGGTTGGCCTAACCTAACTTGAAGGCACACTGATAGAGTTTTGGGTCTGAAATGTTATGTAAATTGTCTTTCGTGGTA TGATAATAGAATTCATTTAGTTAATTGGGAGCTTTGTTGCAAATCTAAAAGTATTGATGGTTGAGCCTTGGTAACTTTCTGTCAAAAACATCGCCTTGTC AACTAATTGGTTATAATGTTTACCTTTAGAGAGAATTCATGGCATAAAGTAAATTGAAGTCTGGTCGTCATGTGAACACTTGGGATGCTCATGTTCCTTA TCAACATAAAATCTCTGACATTTTAACCAAGTCTCTATCTGAAGCTAGATTTCAGGACTTGAGAACTAAACTACGAATCTTTAGCAGACATGACTTGGCT CCCCACCCTTGAATTTAGGGGTGGTGTATCAGAGTAAGGGGTTGATAGTCTGCTACTTTTTTTTCGAATTTTGATATGAGAATCTAGAACCTTGATTCGT GAGGTATTTTTTCCTTGGATAAACCAACTTGGAATTGTGAAGCTCCTACTAAGATCAAACATTTTGTTTTGACAGCTTTACGCAATAGGATTAATAGACT AATGACTGGTTGCAACTTGCAAGTTAGATGGCCTCACACAAGGTATTTAAAATTGTGATCACACGATTTTACGATCTTCAAGAGCTAGTCCATGGAATCG GGTGAAATCGTCATGCTGGAGCGTAGGATCGGTGGAATCGACGAGCTTACTGATTCCACCTACAGCCCGTTTTGGTCCGTGACCTAGGTTGATTGAAACC CTAAACACATTTGCCGCTCCTTTCGCCTCTCTCTGTCCAGGTCTCCCTTCTCCTTTGTTCCATCCTTTCTCCACTTTCCATCTCTTTCTCTACATAATGT CAGTTGAACCCATCTTCGACTCGCTTTGCTCTCATTAGCACTGGAGAATGCAGAGTTTAGATCACCAGCGAATGCACATTGTGATGTATCATGTGTAGAT CTGCGTCTGAAACTGTGCTTCATTTATTTTTCATTGTCCATCTGTGTTTATCCTTTGGAATCACTTATTGGTAGTCCTGGTGAGCATTGGATTTGTCCTA GTTCACTGGATCAATTTCTACAAATTAGTTTTGAGGGTTTGGTAAGAAGGAAAGGAATTCTTGTGACCATGTGCTGTTTGTGGGATTTTGTTATGGGATA TAATCGTTTCTCTCTCATGTCAAGGAAGCGGTCTTTTAGTATTTCAGATTTGTAAAGGGGCTAGTCAGCTCTCCTACATTGACCAAATTTCAGGAGTTTC TTTTCTTTGCCTCTTTTATTTTTCTCTTTCTTTTTCATCTTTGTGGGTGATTTCTTATCGTCCAATGACTTGTGCTTCTATATCACTTGTGCTTCTATAT CTCCTTGTTCTCTAAATTTTTTTCTTTATATATAAAAACAGTTACAACTGGCATGACTCCCAAGTTAAAGCCACTGGCTTGGGTCAAGTTCTGATTTGTA AATACAGTAATACTCATACCTGATTCCAGTTCCTGTAATATCCTGAGATACTTGGAAAATCAGGAAGCCGCCTTAAAATTAATTGCCCCTTTAATCAGCT AGTTTTTGGAACCTTCTGTAATGAAGATGAACAGTGTATAAATTCAGGAAAGAAAATAAGGGTGTGTCGTGCTGTTGGATGACTTTGTTGTTTCATTGAT ATCTGTTATAAACAGGAGAAGCAGTGAACTCTTTAACTTTCATTCATCCTCTATTTGGAGCATTTTTAGGTTTATTCTGCCTACTGTTTTAGGCCAATAT CTTTTCAATATAGCAACTTGATCTATACAAGGATTTTCATATTCATTTTAATTTGCGATTACATTGGCATTATTTTTCAATTGTTTTCTGGTAAAATTTC TACTGCTTGCATTTTTTATTGGCTTAACGTATGTTCCATTTTAGGAAATTATAAGAGATGATGATGAGAAGCTGATTGGGCTGAGAAGTGAGATCGGTGA AGGAGCATATAATGCAGTTGTGACAGCTCTGAAAGAGATAAATGAATATAATCCTAGTGGGCGGTATATATCCTCACAAGTCTGGAACTACGGACAAGGA AGGGTGGCAACTTTGCAAGAAGGTGTGCAAGTTCTACTGAAGCAATGGAAAACATATAAACGGAAGCGCGGAATGATGTGAAAGGTTGGTATGTAATGTA GAGTTTCTTTTGAATTGTCTAACTTGAACCTAGAAAGAAAACATTTATAAAAAAGAACCTATAAAAACAAGATTTTAAAGACTGGATGATATATGGTTTG GTTACTCACAAGAAAACCTAGGTTCCTTCTTTTCTTAAGAAACTATAACTAGTTAATTTATGTAGTATTCAGAAGGGTTTTTTCCCCTTCAGATATCTTG TTTTATTATCTTTACTGTTCCTATAAGCCCTTTAATTATGGATTATATTGCATATAGGTTGATGCTTGTCACAGAAGTTAACATGTTGCACCTGGAGAAG GGAACTACCCTTAGAAGCTGGGTACTTTACATCCTTATTTGAAAAACTGCCATACTTGATGGTTGTGTGTAATGAAGGAATTTATGATGTTAATCTGTTT ATTTAATTTGGCACTTCATGCTACTGTGGGTTCTTTCTGAGAATCAAACTGATACATAAAGGATGCCTTAGTGCTGTCTCTAGTGTGTGAGAAGACATTA ATGTTAAACTTTGTATGACTATATATTATTTATCTTTAAATTTTAGCATTTCTCTTTCATATTAGTCGAACCGCATGCTGGGATTGCATCCTGGCAAAGG GCATTACTGGGATGTCATTCTTATTGGCATCTCAGTTTGCCATCTTCGGCTGCTATCATGGCGCTATCCTAGATTCGCAGCCTAATCCGATGCAACAAGG ATAACAGAGTGAAATCCCTGTTTCCCCTCAGTTATAAAGGCCCTTGTGTGAGTGGCTTTTAGATCATTAGACAAAAATACTATTCTCACCATTCTCAGCT TAGTTTTCATAACATCCTTTCATGTATCAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_158011; |
| Additional information | - |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_328314
| Blastp | - |
|---|---|
| Blastx | Protein INVOLVED IN DE NOVO 2 from Arabidopsis with 59.74% of identity |
| Eggnog | XH XS domain-containing protein(ENOG410YGHF) |
| Kegg | Link to kegg annotations (AT3G48670) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419285.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |