| Id Trinity | TRINITY_DN48254_c3_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_303973 |
| Sequence | CACCAACGTTGCAATCTCACTCTCTGACGAAACCTAAAACTTCAATATCTTTTTGATTCTTCACTTTCTCTTCTTTCTAACACCATCCATGTACTTTGCT AGAGAATGCTAATCCTAATCAAAACCATCTTCATATGCATGATGTTGCTTATGTGCCTGAGGAGCCCATTTCCCCCCTGCAAGTTCATTCTGATGAGGGA AATGCGGTCGATGACTTTGAATTTTCTCATCCTAAAGAACATGATGCAGGCACTTTAATTGAGGATGCCGATCCTTCTGAAAACCATTTTCATGGACATG ATGTTGGAGGTTTTCCTGAAAACGCATATTATCCCTCACAAGAGCATATTCCTTTTGAAAATCACGTTCACGGACATGAACTTGATGTGGAAGTTTTTCC TAAAAACACATATCACACACAAGAGTATATTAGTCAGGAGCCCGAGCATCATGCTGAACGAAATGTGACTGGTGACTTTGCTTATTCGCAACAAGAGGGA TGCAAGAGTAATTCCAAAGGAAATGAATCATGTAGGTGGCCAGGGTGGCCTGGACATAATGTTTTCAGGTTGTTGGTTCCAATGCGAAAGGTTGGCAATG TTATTGGCCCGAAGGGCGAGCATATTAAGAAAACTATGGAAGAGACTAAGGCGTGCATTAAAGTTCTTAGTGGTCCACATGGAATACCAGAAAGAGTAGT GAGTCCACTTTTGAACTTCCTTCTTGTTGTTTTATGCATTGAGGGTCGAATGATCTTGCATACATCAGTGTCTATTTGATGCATGTGATGATTTTTTAGC ATAATGAACCCTGTTTGATGCGTGTGATGCTTATTTAGTATGCATTTATTTTAACTCTTACCACGGAACTCCTATAGATTAGAGCTATATCTTTGGGGAA ATTGCTTAATTGATTTGATTTGGATAACTTATGGGTCAAACAAACTTCTTATATTCTTACTTGATATTGAAAATTAATGATATATCCATGATAAAACATA AAAGATTTAGGAATTTAATTGTGAAGGTATTTTATTAAAACTAACAGTTGCCTAGGAAGTAAAACCATAAAATAGCCAAGAACCAAACAAATCACAAGAT AAATTATGAAGAGTTTTTGTTGCCACGATAACCAAATGGATATGTGCAGGTCTGTCAGCAAATATGAATGACTAAAGTGACTTCGAACTTGAAGATCCAA AATTCAAGTTGCAGCGAAACAGCAATGAGCATATGCAAGTGCTGAAATGCTGTTTTTGTGTTAAGAAATCAGAATTAGTTTGTGCAGATATTGGTGGCAA AAAGCTTTCACTGCCTGCACCTGGTAACTTCAAGAACTTGATCGGTTTGGTGTCTTGATACCACACTTGGTCGATTCGCGGTCTTCAAAGAAATGGGAAT AATATTAAAACACAATGTTTTTTCTTTGCTTGTACCATGATGTTTCTGAACAAGCCTTTGTTTTGTTGAGCAAGTTTGATAATTTATTTATTTTTAGTAT TTTTGAGATTTCACCATTTTTGTAGCCAGTGTTTCTGAATTCTGCTTCTTTGGTGCTTTTAAAAGGTATTGATTTCAGCAAAAGAAGAGCCAGATTGCAC CATACCACCCGCGGTTGATGGTTTATTGAGGGTTCATAAACAACTTTTCAGTGTGGAGCATGTATCGGCTGACATTGCATCCAGTGCTAGACACTCCATG ATCACTAGGCTTCTAGTGGCGAATAGTCAAGGAAGAAGCTTAATCGGAAAGCAGGGGACAACAATAAAATCCATTCAAGTGGCCTCTGGTTGCGCTATAC GGGTTATTAGATCAGGTTTTCTCACAGCTAATAAATACTGCCAGTTTTTGCGTTGCAAGATGATAGTGTTGTTGAAATACGAGGGGACGCCACTAGAGTT CACAAGGCAGTTGAACTTGTTGCACTTTATTTACGTAAATACTTGGTTCACCACAGCATAGTCAGAGTATTTGAAGCACAGATGCAAAGGCTAGATGTTC G BLAST |
| Tissue | pods |
| Gene name | LI_gene_159457; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_303973
| Blastp | Flowering locus K homology domain from Arabidopsis with 62.3% of identity |
|---|---|
| Blastx | RNA-binding KH domain-containing protein PEPPER from Arabidopsis with 41.46% of identity |
| Eggnog | mRNA transport(ENOG410XNN8) |
| Kegg | Link to kegg annotations (AT3G04610) |
| CantataDB | Link to cantataDB annotations (CNT0002412) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019424840.1) |
| Pfam | KH domain (PF00013.28) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |