Ll_transcript_304266

• Id Trinity: TRINITY_DN48263_c1_g3_i2
• Name Transcript: Ll_transcript_304266
• Sequence: ATTCACTTCAAATCAAATAAAATTAAAGTACACTGCAAGCATTTATACTAAGTTTATGTGCCATTTCTTTAACCAATATTGAAAAACAGCTCAGAAAGAA AAGAAAAAAGAAAAAAATCAAAGCAAAGAACAACATAGAAAGCAAAACAGGAAAAAGGAAAGAAACAGATCTTACTGTTTTCCATAATCTCTTTGAATTA AGTAAAGGTAAATTAACTTTCTATGTTCATCTAGCTTCTGTCTCATTCCCACATCTAAAGAAGCAGAAGCAGAAGCAGAAGCAGAAGCATCATCAAACAT GGGTTTGGGTTTGGCATCATAGAAAGTGCTTAAGGAATTAGTGTTCATGGATTGGGATTGGAAAGAGTTTACTTGGTATCCATCTGGGTTGGAAGTTGAT GCTGCTTCAGTGGGTTTGAGGCTTGGTGGGGCTTCTGATTTGATGGAAAACCCGGAATTAGGTACACCTAAGGAATTGAAAGATTTAAAGACTGTGTTAT CAACTCCGGGGTCATCGAAGAGATCGCGTTCGAATAATGGATCGCAGAATTTGTGTTGCTTGGTTGATGGCTGCAACTCTGACCTCAGTGATTGCAGAGA GTATCATAAGCGACATAGGGTCTGCGAAAAACACTCGAAAACCCCTGTTGTATTGGTAAGGGGTAAAGAGCAGAGGTTTTGCCAGCAATGCAGCAGGTTT CATTCACTCGCGGAGTTTGATGATGTCAAGAGGAGTTGTAGGAAACGTCTTGATGGTCATAATAAGCGCAGGAGGAAACCTCAGCCACCGTCTCTTTTCA TGGCTGCCGAGGAATTTCTGTACAATTACAAAGGGCCAAGGATCCTGCAATTTGGTAGTCCTCAGACATATGCAAACCCTATTATGAGAAATGTGTGGCC TGATACTGCCAAAACTGGAGCTGAATCTGGTTATGATCATCACCGACTTTTATATCGAATCGACAAGCATAAGCAGGAGAAGGAAGTTCTTCTCTGGCAA GAAAATGCCCCGAAAGCAAGCAATGGTAATGAAGCAATGCTTGGAACTCCAATCTGCCAACCGACTTCTGGTGCAATTGCCGCATCAGCAAGTGGAAAAG GCAGCCGGAAACTGTCTTCTGATAGCAAACTTGGATCTTTTGACTCAAGTTGTGCTCTCTATCTTCTGTCAACACTTCAAACACAAAGCTCCAAGTTGAG CTTGGTGCAGTCTGGCACCACCTGTCCAATACAATCTCCAATAGGATCTGTGAATTTCGATGCTGTGGATGAGTACTCGTGCTCGGGAAGGGAAATAGAT AAGCCTAATGGCGAGGTATTTGTTCTAGACTCGAATGCAACCAAAATTCATTGCAATGGGATGCTGCAAATGGGACCTGATGGATTGGTGAAAAATGGGG ACTCACTGACCCTTCCCTCTTTCTGGGAGTAAGTAGCAAAGTTGTTATGTCTTTTCTTGAGAATTTTATGGAATTTTTGGCCTTAAGTTTTGTGGTCCAG TAATAAAGCTAAACTTGTTAAAGCTTTCATTAAGGGTCCTTTGTCCCAGACAATTTAAAATGGGAAAGTAAATTAATTTAAAAGCAGGCTAAGATGGATT TCTTGGCATCAGCTACAGCTATGTGTTCTCACAGTTGTAATGAAAGCTGTTTATGTTGCTTTCTATAATGAGGGATTTGTAGTTTTATAGTAGATTTTAT TTTCTTATTAATTAAAAATAACTTCAATGACAGTTAATCCCCCTAATTGCTTAAGACTTTGATACTGAAAATATTCATTGTAAACATGAGATAGATGCTG ACATATGGTGAGATCGGTTACATGTCATAATGCCTTGTGTAAATCATTTTCATTAAAAAGAAAACATTAATCACTAAACG
• Tissue: pods
• Gene name: LI_gene_159546;
• Additional information: details;

Expression of Ll_transcript_304266

FPKM

• PAB: 8.8
• PNAB: 11.6
• PS1: 10.2
• PS2: 2.6
• PS3: 6.7
• PW1: 11.5
• PW2: 11.3
• PW3: 5.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_304266

• Blastp: Teosinte glume architecture 1 from Zea with 45.41% of identity
• Blastx: Squamosa promoter-binding-like protein 16 from Oryza sativa with 52.86% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: gma-MIR156c (MI0001772)
• Ncbi protein: Link to NCBI protein (XP_019458881.1)
• Pfam: SBP domain (PF03110.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;