| Id Trinity | TRINITY_DN48284_c2_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_303194 |
| Sequence | AATGAATAACTTCATATAGAACTCCTATATTAAAGAGAGAGAGAGAGGGCTCACAGCAGAACAAGTCTTTCTCTACTGCCGACTCATTCTTCTCTCCTCT CAACATGTCTGGCTATCCCAACCAACCTCCTAGCTATGGCTACGGCGCCCCACCACCACCCCAAACCTATGGCGCCCCTCCTCCATCCCAATCCTACGGC GCCCCTCCTCCTTCCCAATCCTACGGCGCACCACCACCATCCGCTCAGCCATACTCCGCCAGCTCCTACGGTGGTCCCCCTCCACCTTCCGCTCCTTACG CATCCTCCCCTTACTCCTCATCCTCAGGTGGCCCCACCAAACCCCCAAAAGATCAATCATACTCCTACGGCGCTGGCGGTGGTTCCTATCCCCCAGCGCC GGCATACGCCAGTCCTTTCGCGGCGCTGGTGCCGTCGGCGTTCCCTCCGGGAACCGATCCGAACGTGATCGCTTGCTTTCAGATGGCGGACGCTGATGGC AGTGGGTTGATCGATGATAAGGAAATGCAGAGAGCGCTGTCTTCTTATAATCAGAGCTTCAGCTTGAGAACTGTTCATCTTCTCATGTATCACTTCACCA ACACCAATATCAACAAAATTGGACCCAAGGAATTCACATCTCTATTTTACAGTCTTCAGAACTGGAGGGGCATTTTTGAGAGATTTGATAAGGATAGGAG TGGCAAAATCGACTCGACTGAGTTGCGAGATGCTCTTCTGAGTTTGGGTTATGCTGTTTCTCCTTTGGTGTTGGATTTGCTCGTCTCCAAGTTTGACAAA ACTGGCGGAAAAAGCAGAGCTATAGAATATGACAATTTCATCGAGTATGGCTTTCGGACAAATTTCTTTTTCTTTTATTGCATATAACTTTCATTATATT ATGAAAAGGGTTCTGCACTTGGTGTTATTCTTCTCTTGCAGGTAAATGCCATCCTTAATGAGTAGGAATGGCAACGGGTGGGGTTGGCTTTGTGCTTACC TAACCTCGAACCCAAAATTTAAAAACCGAATACGAATCCGAACCTGAATTCGACGGGGTTAAAATTAACACTGAAATCCCCAAACCCGTCGAGTTTCGAG TAACCCAAACCCGGTGGGGAACCTAAAAATATTACTCAATTTATGCAATCCTATCAATTTAAATTTAAATTTTGAAATATTCTAATGCTACTATTCAATG CTGCTATTAAATGATATTAATTTTCAAACACAATGTTGCTATTAAATTATTAATTTATTGAATTTATTAATTGGGATGAGTTCAAGGTAGGTACTACATG TACTAAACCTGAACCCAAAAATTAACGGGTAAACCCGAACCCAATGAAAACGGGTTTAACCCGTTAAATTTGGCTTGAGTTCGAGTTGGTATCCACGAGT TCGATTTTCATTGTCATCTCTAGTAATGAATCCTAAAATATAAGGATTGCATCCAAACCTCAACTTTAAATCCTTACTAAATACATAATTTTCTAATACA AATTTTTATCTTAACGTTTCCCTTTTCTAAAATAGACACATACATATATGTGTATTAATATATATATATATATATATTTATATATGTATTAATATATGTG TCTGTTTTCAGATTTAAATAAAGGGGTGAAACTCAAACTCAACAAAATTGACTTCTTTTCTTTAGTCTACCTGCATTATGTGCACCTAATTTTTATATTG AAGTGAAATGTTGTTTTAAACTGATTCTCTTTCCTTGTTTGCTAATGCAGGTGTTGTCTTACTGTTAAGGTAAGTTACAAAATCACTGAGTTACGATTTT ATCAGTTTCTTCAATTAAAATTACATCTTATCTGTTACCTTCTATAAGACTGTATCATACTAGGATGATTAAGAGAGCAACATACTCATTTTCGTGTAAT TTCTTGAGTTATTTAGATGATGCATGTAACGTAATCAACCAAGTTTTATTCCTTTATTAAGGACCATAGTTTTTTCTACTTTATGGTCTGATTGCGAGTT AGGTTTTGGAGGGGAGGAAAAGCAAGAGAAGGTTTTAGAACTGTCTCATAAGTATATTTCATGGCTCTCAAGCCTTCCATTTTCATTGCCCCTTTCCAAA ACTAAACTCGCAAACGGTGAAACGGGTTATGTTGAAATGAAGGTAATAAGCTTCTGTTTTCCTTATGGGAAGGTAAAAGATCTCTGACTTTAAATGTGTA TTGCAGGGACTGACTGATAAATTCAAGGAGAAGGATAGTGGCTATACTGGCTCTGCAACATTCTCATATGAGTCGTTTATGCTGACTGTTCTGCCATTTC TTGTAGCTTAGGGAAATAATGGTGGGTTGTGATCAGTTTACTTTGTAATTGGCCTGGCTGAATTTGAAACTGCGTGTAGTCTAATAAGTGTATTTGCCAG TTTTTAAAGATATGCTGCTATTCTATGCTGTTTACTTAAACAAACCGTGTGGTTAATGTGATGGTTGTCATTGCAATGTGAATTATGGGTGTTGTATGAG TTTTTTTTTTTCTGATTAAAAAATATCTTTTAATTTAATGTGGTCTGTTTATTGTAATTATGGTTTGATGTGGTTGGATTATGAACTCAATGAAAATGGG TTTCCGTGATAGTGATGTTCGTCT BLAST |
| Tissue | pods |
| Gene name | LI_gene_159762; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_303194
| Blastp | Probable calcium-binding protein CML49 from Arabidopsis with 59.77% of identity |
|---|---|
| Blastx | Probable calcium-binding protein CML49 from Arabidopsis with 81.12% of identity |
| Eggnog | grancalcin, EF-hand calcium binding protein(ENOG410YKQK) |
| Kegg | Link to kegg annotations (AT3G10300) |
| CantataDB | Link to cantataDB annotations (CNT0002570) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019442952.1) |
| Pfam | EF hand (PF13202.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |