Ll_transcript_302580

• Id Trinity: TRINITY_DN48290_c0_g1_i4
• Name Transcript: Ll_transcript_302580
• Sequence: GTAAATCTCCTTCCATTGTCCAATAACCATACCTCCTCTCGGCCCTTTAAGGACCATTTGACCCTGACGTTTTTTCCATTATTAAATTCTATAATATAAT AAAATAAAAATTAATGCATCTTGTAAAAATAAAAAAAATCGTTTTTTCATAGTACTAATTTTATAACAATTCAAAACACGAACCCGAAATCTCACACATT CTTGAGTGTTCTTCTTCTTCTGCATCATTTGTTTTGACTTGTGTTCTTCTTCTGCATAATTTTCAGATCCGATCCACACAAAAAAAATGAATATTTTCAG GTTAGCTGGTGATATGACCCATTTGTTCAGTGTCCTTGTTCTTCTCCTCAAGATCCATACCATCAAATCTTGTGCTGGTATCTCGTTGAAGACTCAAGAA CTCTATGCACTTGTTTTTGCTTCTCGCTACTTGGATATCTTTACTAATTATATATCCCTATATAATACCTCTATGAAGTTGATATTCTTGGGAAGCTCGT TTTCTATTGTATGGTACATTAGGTACCACAAGATTGTTCGTAGGACATATGACAAAGAACACGATACCTTTCGTCATTATATTCTTATACTGCCCTGCTT ACTATTGGCTCTAGTTTTCCATGAGAAATTAACATTTAGGGAGGTGATGTGGGCATTTTCACTGTATTTGGAAGCTGTTGCCATACTTCCTCAACTAGTA CTGTTACAGAGAACTAGAAATATCGACAACTTGACAGGACAATATGTGTTTCTTCTCGGTGCGTATAGAGCATTATACATTCTCAACTGGATCTACCGCT ACTTTACCGAGCCCCACTTTATCCATTGGATAACATGGATTTCTGGGCTTGTGCAAACACTGCTCTATGCTGACTTCTTCTACTACTATTTCCAAAGTTG GAAGAACAACCAAAAACTTCATCTGCCAGCATGAGCAACATAGTTCTTGGAAATTAACAGTGAGAAGACATGATCCATATATTTGTCTGGGCATAGTGGT TTCTGAATTTTGATTCCATATATGTTCTTTTGTTCTAAGTACTGTCATGATTTTTAAGACAAAAATACATCAAATTGTTTGGGATTGTAATCATGCTATT TTTAACTAGAGAAAGTATTGAGATTTATATATGGAAGACACAAAGTTTGCTTCAACCACTTCGAGAAAAGATCTATACACTGACAGTGTAAGATTTATTA GCAATTCTTACCATTTTTATGACCATTAGTAAGGACTATTTTGACTCATGTTCGTGATATTTGAATACCTGTTGTGTTATTATTATAATGAAGTTTGAGT ATGCTTAAGAAGCTGTTACCAGCATTTGATCTAAAA
• Tissue: pods
• Gene name: LI_gene_159809;
• Additional information: details;

Expression of Ll_transcript_302580

FPKM

• PAB: 23.6
• PNAB: 37.8
• PS1: 24.4
• PS2: 19.9
• PS3: 27.1
• PW1: 28.2
• PW2: 27.3
• PW3: 18.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_302580

• Blastp: ER lumen protein-retaining receptor B from Arabidopsis with 84.19% of identity
• Blastx: ER lumen protein-retaining receptor from Petunia with 85.12% of identity
• Eggnog: Required for the retention of luminal endoplasmic reticulum proteins. Determines the specificity of the luminal ER protein retention system. Also required for normal vesicular traffic through the Golgi (By similarity)(COG5196)
• Kegg: Link to kegg annotations (AT3G25040)
• CantataDB: Link to cantataDB annotations (CNT0001350)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019450093.1)
• Pfam: ER lumen protein retaining receptor (PF00810.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;