Ll_transcript_303582

Id TrinityTRINITY_DN48297_c0_g1_i5
Name TranscriptLl_transcript_303582
SequenceGAAAAGGGGGAGGGGCAAGCTCGGAAAGAAAGTGCAGTTGTTGGATTCATAATTGATTGAACGAGAAGAGCAGCTAAGTGATTAAGTGTGTGAGCCATCT TTCTCATTTCTTAACAAAAATCACTTAATAATAATAAGCACTCTTTCTCATCTAGGGTTTACTCTTTCTCTTCAATCTCTTCTCTGGTCTTATTATTAAC TAAAAAGAACGCCATGCGTGGGTTTCAAAAATCGAAACGAGTAACATGGGCTTCTGCTTTAAATCTTTGTCAGGATGCTAAATGCAAGATCTCAGTCACT TCCAACATGGGAGGGCCTAGCCATGGTGATAGTTTCTGGAGGTGTACTGCTGGTGCATTCAGAAGCATCTGAGGGAAAGTTGACCAAAATCCTTGATTGG CCAGCCTATTAACTCAGATCTCACCTTTCAGAGTGTTACTGAATATAACTCGTATGATGTCTGTTGTGTGACATTAGGATGATAATGAAGGGATGGAGGG TGGCAAGATCTGATTCGAGACATTCTGAAACAGCTTACCATTTGGATTTAAGAATGTTATTACTTCTGGTCAATCTTGGTGCTACCCCAAGTTTTCTGTG TACTAATTGGTGAAAGAAGGCCAGATTCATGTGTAGGAAAATCTTTCATTATGTGTCCAGGTTTAATGAGAGGCATAGCCATCAGTATCCTGCCTAGCAG GCTAGCAGCAAGGAAAAGATTAGGGGGGACTTTGGATGTAGTTTTCCTTTGGTCCCTACACTTGGCTATGAAAATCTAAAAAAACCATGAGGAACAGAAG ATCTCGATGCCTAACCTTTAAGTACCTATCAGATGAAACTTATGGATTTCAAGTTGAGTAGTTTTAGGCTCTTTATTTGATGTTGAAAAAAACATACATT CATCTTGGGATTAGAAATTAGATTGGCCAAACTGATTTTTGGGTGTTTTGTTGAATGCTATCTTTAACACTTATTTGAGGATTTCTCCTCTTGCCCATAG AAATTTGAGTCAGAAAGAAATTGAAATGAGCACATGACATATGATCACTCTAATGATTTTGATTTCTATTGTTTTATCAGAATGTCACTACAAATATTTT TGCTAGGTCTCACTATATTGTGTTTTAGTGACCACAGTTCACAATTCATTTATCAAAGTTTATACTTGGATGTGATCTGTCGTGAATTGGTTGAATGTGT ATTGTTCAGAGGATTTTCTTTCATGTGAGAGTAGAGTCTGATGATGTGAATTCATTTCATGCACAATATATGTTCGGTCTCTTTTCATTTTGTCATATTT GATTAAGGTCATTTGATTTTTATTTTGTTGTTGTTTTCAATCAGTGAATGCGAGCCCTATTACTATATTTATATACACACCCTTAGTGGATAAGATGATT TTCTGTTCTGCGCGACTTTGCATACGAATAATCGCCATGCAAAGAAGATGCTGCATAAATATTGGTTTTCAACAAGTGTTAGAAGAGATGTCAAAGGTAG AAGACTAATACTTCTTTGTTAAACAGGTTAAGTTATTCTTATCAGAGGACTCTCCTTCTCTAGTTGGGTTAAGTTCTCAAGATCACCTCCAAGCAAAGAG ATCATTGTCCTCGCATCCAGATGGAACAGGTTCCGATGACATCCTACCTCCTGGCTTTGAGGGAACTCATGCTTCAAGCCTGTTAGAGGTCGAACCGGCC CGGATACCGGTGATTAAATGGATTAGTCCACCCAAGATGGTGCTAGATTTAACATGGCAAGTGGTGGCTGGGGAAGAAAGCAAAGAGGTAGAAGATCAAC ATAAGAGGGAGATGAGAGTACTTGAAGCTATTTATCCTCGTCCATCCGCCATTCCTCCAAACCCTGCTATTGCAATGAATGTTGAAGACTCCCGTTCCAT CGATGATGGTCGAACTGCTTTGATACCAATTACAGCTATTGAAGATGAAGATGCTGCAGTAGATGCAGTATCTGATTCACAATCTCTTGAATTACCTCCT GGCATATCAAGAGGTCCAATGCAGTTAGCTGGCGGTGTATTATCCGATGTAGCTGCCGCGTCTGTAGCTTTAACTGATATAATACAGAGCAATCAGCATG GAAATTTGGTTGATCATGAAGTGCTTAATAGTATTCTCAACAACCCAGAATTGATTGAGAAATTGATTAGAGAATATGGAGGTACTAATAACTTGCAATA TGTACATAATCAAGGGTTGTCTTCAGCCGCTTTTTCGCATTCACATATTCCTAATAATCTAGGAGAAATCAGTATACCTTCAACAATTGATCTTTCAGCT ACTTCTTATCCTCCCTCAAGTGTAGGTCAAGTAGTACCTGTTGCTACAAAATGGCTTCCTAGGCCTTCGATGAGTTCGGTTACCGTATCTACTCCTATTG AAGTGCTATCGACAAAGGATGTGAACTACTATAAGAGCTTAATTCAACAACATGGAGGAGATACACAAGAAGAAACACTTCCGTATTCGAGAACTCGTCC GATCCATCAGCCAGTTACTAACCCTGAGACAGCATACATTTCTAGATCAAGGAATTCAAAACCAAAGATAATGAAACCGTGCATCTTCTTTAACGGTCCT AGAGGATGTCGAAATGGAGCTAATTGTGCATATCGGCATGGTGCACCATTCCACCCACGAGATGGCACGGTGTCAAGGATACAAAGTTCAAAGAGAATGA AAATGGATAGTGAGATTAGCAGTTAACTGAATACTTAGCACTTAGCAGCTAGTGTTGAAAGCATTTTGAGTGATTGTGAGCCTTATGAGTATCTAATATT ACACATATCATTATTGAAAAGAATGCTCCACTCCATTTTTCTTTGATTGATGGAGAACATACAGAAATTGTAGTTTTTCTGGTGCTTTATTCATGATTCT GATTCAGGTGCTGGCCTCTCCAGCAAGATGATTCACTAATTTTGTTCACTCCTATTTGTGAAATGTGGATATATAGTTTGCATTTTGTGCATTTGAATGT CTTTTGTGTTAATGTTGGCAATAGTGTGAAGATAACAAGAAATGCAAATGGAAGCAATGAATTTTCT BLAST
Tissuepods
Gene nameLI_gene_159847; 
Additional informationdetails; 

Expression of Ll_transcript_303582

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_303582
BlastpZinc finger CCCH domain-containing protein 6 from Arabidopsis with 38.22% of identity
BlastxZinc finger CCCH domain-containing protein 6 from Arabidopsis with 39.48% of identity
Eggnogzinc finger CCCH domain-containing protein(ENOG4111W68)
KeggLink to kegg annotations (AT1G19860)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019438044.1)
PfamRNA-binding, Nab2-type zinc finger (PF14608.5)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;