Ll_transcript_440972

• Id Trinity: TRINITY_DN48341_c4_g2_i2
• Name Transcript: Ll_transcript_440972
• Sequence: TATAATTACTATGTAGGCATTTGAAATTTTGAATAGAGACATACAAACCATGGAACATGAGTCTGTTCATGTTTGGTCTCTATTCAATCCTAAATATTAA TTGAGTGAGTCTGGTTTTTGAACTTAAATTCAATACTAGAATCGACGAGATCCAATCATATTCGGACCGAGTCATAATCGGGTCGTATCGGATTAACTTG ATAGCTAGACATCATGCTCCCCTAGCATGAATTGGAGGAGTAATAAAGTCTAGGTTCATTTCAGTGTGAGTAAGTATAGTATCAACCAGTAACTGAATAT TCTCTACACTCTCCATGGCACAACCCACCACCACCACTACCACCACCACTACCACCACCACTAGCCCTATCAAGATCATCGCCGCCGCCGACGACTTCGG CACACCACTCAAAGACGCTCTAGTTTCCCACCTACGCTCCCTCGACTTCCAAGTCCAGGATCTCGGCACTTCTTCCTACTACTCCGCCGGCGCCGAGGTC GGCCGTCTCGTCTCCCAATCCCTCTCCGACACTCGCGGCCTCGTCGCCTGTGGCACCGGCGCCGGAGTCTCAATCTTCGCCAACAAATTCCCCGGCGTCT TCGCCACCACTTGCCTCACCACCTCCGACGCCATCAACGCTCGATCCATCAACAACTCCAACGTCCTCGCCGTATCCGGCAAATACACCTCGCCGGAAAC CGCAATCAACATCCTCGACGCATGGCTCAACACTCCTTTCAAATCGCCTTGCCCTGCCAACGACGACAAACCCTGGCCGCAACAGATCCAATCCTTCCTC GACAATTCCCTCACGGAGATGCCGGAAATCGGAAGAGAACACAGAAAAACCGAAACTCCGGTTGATAATTGCGCGGTTTGTTGTTTGGTTCAAAATCGGG AACTAAACCCTATCGATATCATACCTGGTGGTTCAATGAAGATCATTAGAGAGAGTCCAACCTCTGCATTCGTTAAATTCGAAGCCGGAAGTGTCGAACC GGCGCATCACCACACGTTTGGGCATGATTTGGTGGTGATTGAAGGGAAGAAGAGTGTATGGAATCTAACAAAGGATGAAAATTATGATCTAACGGTTGGA GATTATTTGTTTACACCAGCTGGTGATGTTCATAGGGTTAAGTATCATGAGGATACTCAATTTTTCATTAAGTGGGATGGGAAATGGGATATGTTCTTTG ATGAGGATCTTGATGCTGCTCATAAAGCTATTCAAAAGGAGTTGATTGGTAAGAATTGAGTATGTAAGTCCGGTTTTCGGTAGTTACATGGTTTCCTCAT TTAGCCGGACCGGAACAGGTATCGCGTATCATGTAACTATGGTTAAGTTTCTATTTTGTTTTCAGTATGTATGTGTGATGAGACTTTATGGATTGGGAGT GTTGAATAAATAAGCTGGTCTGTATGTCATGTGAATTGTTTTAAAATTGTGATGGTGGTTGTGGCCGAGGCTCGAATGTGTCGGCATAGTTGTGATCGCA ATGTGCAATGGTTACGGCCGCAATCGCGATATGGCTGTGGAGACTATTAAAACCACAATGTTGTTGTCGTAATTGCAGTTGTGGATTGCAATTTATAAGT ATAGGATAGGAAAAATAGGGATAGCATGATTTCCCATATCGCCTACCTCATTGTCTCGAGAATAATTTAAATACTTGATAGGCTACTCCTCTCATTGCCA ATTGGTTTTGAGATGGAACCTTAACATGGTATCATAGCCACAACCTAAC
• Tissue: pods
• Gene name: LI_gene_160185;
• Additional information: details;

Expression of Ll_transcript_440972

FPKM

• PAB: 8.8
• PNAB: 19.2
• PS1: 35
• PS2: 18.9
• PS3: 29.1
• PW1: 15.1
• PW2: 14.9
• PW3: 10.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_440972

• Blastp: DNA damage-repair/toleration protein DRT102 from Arabidopsis with 67.22% of identity
• Blastx: DNA damage-repair/toleration protein DRT102 from Arabidopsis with 67.22% of identity
• Eggnog: Isomerase(COG0698)
• Kegg: Link to kegg annotations (AT3G04880)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019440508.1)
• Pfam: Ribose/Galactose Isomerase (PF02502.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;