| Id Trinity | TRINITY_DN48347_c3_g4_i1 |
|---|---|
| Name Transcript | Ll_transcript_439761 |
| Sequence | AAGTGAACTACTTTGTTTTTAAGAGGAAAGTGGAATGTGGTAGTTCAATATGTTAGAAATCACACCCAACAATATGTAGTCTTTTAAGTGAAAATTTAGT TCCCTTTATTCATGATAATTCTAAATGAGTTACAGAAGAGCCAATTTCACAGCTGCTGATATGAGAGAATCTGATTTTAGTGGTTCAACTTTCAATGGTG CATACCTTGAAAAAGCTGTTGCATACAAGGCAAATTTTACAGGTAAAGCTTGTTGCTAGTTGAATACCTGCAACTCAAAGGCAATTAATGTCAAATATAT ATAACAAAATTTTAGCTATTATTGGGTTATAGGAGTATAAGAAAAAGTTCAATTTATTCACATGATAGATTTTTTTAGATCCACAGTTCACTCAAATTGT CTAAATAGACTCTGTTGGACCCTGGACTCTAAGACAAACTGATTTTTCCCCCTTGTAAGTCATAATTTAGACTTGGATCTTCTCATTAAGACAGAAGTGT TGCTTTTTTTATCTCATGTAACTCCACAGTTTCTCTGATCAAACATTCCATTATATCTTGTTATATGTGACTTCCATCTTCCAATGCCTCATTTCATTGG ACATTTTCGATTTACATTTTCAGGTGCCGATTTTAGTGATACATTGATGGATCGCATGGTTCTAAATGAAGCCAATCTCACGAATGCCATTCTGGTGAGA ACAGTTCTCACACGTAGTGACCTTGGAGGTGCCATCATTGAAGGTGCTGACTTCAGTGATGCTGTGTTGGACCTTACCCAAAAGCAGGCTCTATGCAAGT ATGCCAATGGCACAAATCCTGTGACAGGAGTAAGCACAAGAACAAGCTTAGGTTGCGGGAACAAACGAAGAAATGCTTACGGATCTCCATCATCTCCCCT GTTAAGTGCTCCCCCACAGAAACTTCTCGACCGAGATGGTTTCTGTGATGAAGCAACAGGTCTCTGCGAGGCAAAATAGTAATACTTGGTATCGTCACTA TTGCATGGCCACATTCATGTACATGTATTTGGAGTACAAGTGAGGCATCATTTGCCTTTGGACTTCTGAGAGCATATTCGCATTAAACAAATGAAGCTCT TTCTTGAACTACCCTAATTGTTCTGTGTCTGTGTGGGATAGTTAGGTCTCTTTTCAGCAAAAGGGAACCTATTTTGTGCAGCCAACCTTTCTCCCATCTT GGTATATGATATATAAAAGCATCCAGCCACATTCATACCCAGATACTGTATTCAGTCAGGTGTTCAATACCGAGTGTACAAGACGAACTTTTCTTAGCAG CTAGTGTGGTTAAGGATTCCCAGACCTATTTAGTTCATTTTTCTTTCAGTGCATAAACTTGTGTTAAAAAGACCATATTTATGCTTAGCATGAGGTATCT GCACAATGCCCAAGCTTTCTCAGATATTTCCTTGGTGCAATTAGCAGAGGAAACAATCATTTCATGATTTTGTGCGCGGGAAAAATTCATCTAGTAGAGT AGTAGTATATCTCCAATGAGATCGATAACACTTTCTGTATAAAAATAATGTTTCTACATCTTTTTTATGAATTACTTGATTAAATCTCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_160247; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_439761
| Blastp | Thylakoid lumenal protein TL20.3, chloroplastic from Arabidopsis with 83.87% of identity |
|---|---|
| Blastx | Thylakoid lumenal protein TL20.3, chloroplastic from Arabidopsis with 83.87% of identity |
| Eggnog | pathogenesis(COG1357) |
| Kegg | Link to kegg annotations (AT1G12250) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_020218225.1) |
| Pfam | Pentapeptide repeats (8 copies) (PF00805.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |