Ll_transcript_438730

• Id Trinity: TRINITY_DN48362_c3_g2_i1
• Name Transcript: Ll_transcript_438730
• Sequence: CCTGTTATTGCTGAAATCAACCATGCTATCGGAGCTGAAGGAGTTCTAAGTGTAGAATGTAAGGATGTTGTTTCTCAATATGGAGAGTTGATATGGGATC TCTTAGTATCAGGGGTGAAACCTGCCGACGTATGTTCGCAAGCTGGATTATGCGCTTTCAAGAAGGACCTATCTGAGAGCGCTGGAATTGAGATGGTAAC CGAAAAGGAGACAGAGTCGAAAACTAGAGGAGATACTCCTTTGTGTTCATCTTGTCAAATGCTTGTGATTTGGATCCAGAATCAACTAAGGCAAAAGAAC ACTAAGGAAAGAGTGTTCAGCTATGTGAACCAACTATGTGAGAGCCTGCCAAGTCCGGCTGGAGAGTCGGTGATAAGCTGCGATAGTCTTTCTCGGATGC CAAACATTACGTTCACTATCGGAGATAAACCTTTTGTCCTTACACCAGACCAGTATATTCTGAGAACTGGAGAAGGCATCGCAGAAGTTTGCCTTAGTGG GTTTATTGCTCTTGATGTTCCTGCTCCACGAGGCCCACTCTGGATTCTTGGTGATGTTTTCATGAGGGTATATCACACAGTGTTTGATTATGAGAATGCC CAAGTTGGTTTTGCCATAGCTGCCTAAACTCACTTCCAAAGAAGACTCTGTATTTTAATAAGTGTTGTGTAAAGAAGCTGTTATTATAAGCTATAAATAC TAATACTCAGGTTCAGTCTGTGTATTCATAAATGTATTTACTTATGCATTTGAAAGTATAGACTTGGAAGTGTTGCATGTGTTTACATTGAAGACCCATG TTTATAATCTTCTTTGTAAACCAGTATTTATACCTTTCTTTTCCTATTATAATTTTACTATATACTTTAAATGTGGTATACTAATGTGGGTGGCAATAGA ATGCATGAACTTCATCCACTTAACTTCTATAGTCCACCAGGCTTTAACATGTGGTCACTTTATGTACAATATAGTTACTGAAGTGAGAACATTTCTCATA TAAGGTAGTTATTGATCACATAGTAATCATGTATATATATCTTTTAATCTTAACCATTCTATCGAGATCCAATAGTTCATATCTGTTCTCATTTCATATT ATAGTGTATTGTTCTTATGTAAGTAATATATAAACACATTGTTCTTAGGTGGTGCCCTGTATATTTGTATATGTATAAACATAATATAGATATACTCACT AAAGTTTGGGATCCTTACATTAGACCCATGTTTGTGTAAGTTTGAGC
• Tissue: pods
• Gene name: LI_gene_160408;
• Additional information: details;

Expression of Ll_transcript_438730

FPKM

• PAB: 286
• PNAB: 127.7
• PS1: 247.3
• PS2: 178.5
• PS3: 283.7
• PW1: 120.7
• PW2: 233.2
• PW3: 398.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_438730

• Blastp: Aspartic proteinase from Oryza sativa with 56.04% of identity
• Blastx: Aspartic proteinase from Oryza sativa with 56.04% of identity
• Eggnog: aspartic(ENOG410XNV7)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419261.1)
• Pfam: Eukaryotic aspartyl protease (PF00026.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;