| Id Trinity | TRINITY_DN48377_c0_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_439575 |
| Sequence | CTTTTGCATGTGAATGTTTCGTATTCATAAACTTTGGTTTGAATATTTAATTTGAAACATTGATAACTAACGAAGATTTGAAATTGAATGACATATAGAA GAGTAAGGAGGAGATAGTAATAGAATTTGGATGCATTAAGCAATGAGTAGTAGTAGTAGTTATAGTTATCGCGTTGCGATTCCAGGATCTTCCATCGAAG ACGAAGCGAGTGAATCTTCTTCTTCTTCATCATTCTCAACTTCATCGCTCAATTTCTCTTCTGGAAACCCTAGAATCGAAGAAACTCGTGGCCTCATGCA TCTTTTCCGTCACGATCCTAACTCTTCTCTTTCATCTTCGCCGCCGCCTCCTCTTCCTGTTGAACGGAAACCTCTTGTGTGTGTTGTTGGAGTTCCGAAT CATATGACTTATGCCGATTTCTGCCAATTCTCCGGTTCCTTTATTCACCATATCCTCGAGATGCGCATTGTTAGATTGGATGGGATGGAGGACTATTACA GTGTTTTAATACGGTTCAATGACCAAGACTCCACAGACAGCTTCTACAAGCATTATAATGGCCGCCGCTTCTCATCTCTTGAGGTGGAGGTTTGCCGTGT CCTTTTCACATTAGATGTGCAGTACACTGGTTCCATTGAACATGCACAGCCATCTAATGCTATTTCAACTGAACAGCCTACATGTCCTGTCTGCCTCGAG CGATTAGATCAAGACACGGGTGGAATTCTTACAACTATATGCAATCATTCTTTCCATTGTTCGTGTATTTCAAAATGGGCAGACTCTTCTTGTCCTGTAT GCCGCTATTGCCAGCAGCAAGCTGAAAAATCTATATGTTTTGTTTGTCAAACCACTGAAAACCTTTGGATATGTGTTATATGTGGTTTTGTTGGGTGTGG AAGATATAAAGAAGGGCATGCCATTATACACTGGAAAGAGACACACCATTGCTACTCCCTAGAAGTGGAGACCAAACGCGTGTGGGATTATGTGGGAGAC AACTATGTTCATAGACTTATTCAGTCCAAAACTGATGGGAAATTGGTTGAGCTGAACTCTCACTGTGTGCATGCAGACAATGGGTGTGGAAGCTGCAGCT TTGAAGATAATGGCATGAGCGAGGCTATACTTAATAGTAAAGTTGAAGCTATTGTCAATGAGTACAATGAATTGCTTGCTAGTCAACTTGAAAGCCAAAA ATTATATTTTGAATCCTTATTAGAAGAAGTAAAAGAAGAAACTGAACAGGAAATTTCCAAAGCTGTTGAGAAGGCTTTGAGTCTCAAAAAACCAAAGATT CAGGCCAAGATCGACAGAGTTAATAAAGAGAAGAAATTTCTGGATGATCTTAATGAGAACCTTGTGAAAAATGAGGAGATTTGGAAAGCAAAGTTACTTG AGATTGAAGAGAGGTTTGTAAACTGATGGATAGAGGGTGAGCATCAACGCAATGGTAAGGTTGCTGCTTAGTGATCATGAGATCACGAGTTCAAATCCTA GAAACAATATATCCGCTTGCAGGGTTAAAGTTATGTCATCTACCCTCCTCTGACTCCACTAGGTGGGTGTCTTGAGGTATGAATGTTGTAAATTGATGGA CGATGTGTTAATTTTTTTCAGGGACAAGAAAGCTGTAAAACTGGCAGATGTTAGAGTAGCAGGCTTGGAAGAACAGCTCAGAGATCTAATGACTTGTCTT G BLAST |
| Tissue | pods |
| Gene name | LI_gene_160577; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_439575
| Blastp | BRCA1-associated protein from Mus with 41.78% of identity |
|---|---|
| Blastx | BRCA1-associated protein from Mus with 42.77% of identity |
| Eggnog | BRCA1 associated protein(ENOG410XSS2) |
| Kegg | Link to kegg annotations (72399) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019436336.1) |
| Pfam | BRCA1-associated protein 2 (PF07576.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |