| Id Trinity | TRINITY_DN48400_c3_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_364192 |
| Sequence | AGAATTGGGGTTTTTATGTTTTTTTATTACAGAGCTGATTCGTGGTTTTTCAATTCCAGTTGATACATTAATTAAGCTAAATGGTCTTACTTTGAAGAGT TTTTGCTGTTTCAGGCTTTTCTTTGAAGTTGGAGTTATTCTATTTAGGTGAATCTCTAAGGCACATTGAGAGTCACGAGTAGCATGTCAAGTAGGGGTGC TTCTCGAAAGACGTCCAAGGGCCGCCGATCATCAGCATCAGTTCAAGAAACTAGTGAAGTTCTTTTAATGAAAGGCCCATGGACAGTAGCAGAGGATGAA ATTTTGACAGAATATGTCAGAAAACACGGAGAGGGAAACTGGAATGCAGTACAGAAGCATTCAGGACTTGTCCGTTGTGGGAAAAGCTGCCGTCTACGAT GGGCAAATCATTTGAGACCTGATTTGAGAAAGGGTGCATTTACTTTAGAGGAAGAGGATCGAATCATCGAGCTCCATGCTAGAATGGGGAACAAGTGGGC TCGAATGGCTGCCGAGTTGCCAGGACGTACAGACAATGAGATAAAGAATTATTGGAACACAAGAAGTAAGAGAATGCAACGTGCTGGCTTACCACTCTAT CCTAAGGAGATATACCTACGGGCGTTTAACAACAATCAAGAAAATCTAGACGTCGGCACCGTAAAAAATGAATCTGGCCAGGATGATGATGCCTCACAGA CAGACAACTTTGATATACCAGATCTTGATTTCAAAAATTACAAAATTCACCAGGATCTATCTTATGCACCAGCAATTTTTGATATACCTGAAAGCAACAT GTTCAAACAACCTTCAGACTCATCCCACAGTTATAATGCCATGTCCCCAACAAATCCCAGAAAGCGCCTTCGAGAGCCAGATGTGTTATACAATAATAGT TTTGATGGTTACATCAGTAATACTGTCCCATTATTTGATCAGTATGGCAATTACCCTAGCGAGAAAGTTTCTGACCATCCTAGGTTTTCTTCTCCATGCA ATCTCATTCTTGACACCGGTCAGTTCCATGGTTATGACTTTCCTGGCAGCCATGCCGCTCTAAATGGCAACACTTCTTCTTCTGCGCCCATAACCGGGGT CATGAAGTTGGAGCTCCCTTCACTCCAATATTTTGAAGACCAACAAGGTAGCTGGGGCATGCCTGCATCCCCACTTCCTTTGCTTGAGTCTGTTGATACA TTGATTCAGTCTCCTCTAACTGATCCTGCTCTGTCGGATCCTGTTTCTCCACGGAGCAGTGGTTTGTTGGAAGCAGTAATCTGGCAATCCAAAAATTTGA AAGGCTCAAATAATAATTCATTCGAACAGACACCCGGAAATTGTGTCTCCAATGAAGCAATCGACAGTTCAACCTTGAATCCTCCGATGACAGAATGTGA TGAACAATGGGTGCTAAATTACCCCTTTGATCATGATATTAAGCACATATCAGTCCCACAGTTCCCACCAGCTTACTGTTCCTGGAATGATACAAAGTTG AGCAAGGTAGACCTTACAAGACCTGATGCTTTATTTGACGTTGCTTGGTATGGGAATACCACTGAGTATAGCAAGGATCAAAATGTTCCAATAAATGCTT TAGATGACTTTCTAGGTGATGATTTCCAAGGTTAACTTGCAAGCAGGTGATTTGGATATTATTGTTTTTCCCTCTGGTGCAGTACTTGTTCATGAGATGA CTTATAGAAGTTCAAGTTTTTTCTATTCTCGGTCACTTTTAGAACCTTCATCTATGATTCACAATAAATTTTAGATATCTCAATTTTATAGTCTTTTGAA GTTGATGATGTGCTTTCTTTCCCACTTTGACACTTTACATGGTGCTGATATTGGAATAATGGTATTTTCAAATTGTTACATGCACAATTGAAAGAGGCTT ATATTCCTTATTGCCATAAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_160769; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_364192
| Blastp | Transcription factor GAMYB from Oryza sativa with 40.64% of identity |
|---|---|
| Blastx | Transcription factor GAMYB from Oryza sativa with 43.22% of identity |
| Eggnog | Myblike DNAbinding domain containing protein(COG5147) |
| Kegg | Link to kegg annotations (4327362) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019441342.1) |
| Pfam | Myb-like DNA-binding domain (PF00249.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |