| Id Trinity | TRINITY_DN48423_c4_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_362929 |
| Sequence | GTTAAATCAATAAAGTTATCACTCCCTTTGGTACTGTGGGCCCTTCAAAATCCCTATATATATCAACTTGTGTAGCCACATTCTTTCAACAACTATACCT TCGATTTCTATTACCCCACCCAGCATTTTAGCATAATCACTCTGGTTACTACAAGCCATCATAACTTTATTCTCTCCTTTGTATATATGGCTCCTCTCTT CACTCTTCTCACATTTTCACTCATAATTTGTTGTATTAGTGCCAAGGGTACACCTTCACCTGGTTACTACCCTAGTTCCAAAGTTAGTCCTGTTAGCTTT GGTCAAGGGTTTAGAAACCTATGGGGACCTCAGCATCAGAAACTTGACCAGGGCTCATTAACAATATGGCTTGACTCTAACTCAGGGAGTGGATTCAAGT CACTTCACTCTTATCAATCTGGATACTTTGGTGCTGCAATTAAGCTTCAACAGGGTTATACTGCTGGAGTCATTACATGTCTCTACGTGAGGAATACTCT ATAACTTCAACTATTGTTGAAATTTGAGTATACCCTTTTTTCATTTGCAATTCCTCATCCCTTTGCTTTGTTCTTTGATTGGAAAATTGTAGCTTTCAAA CAACCAAGTCTACCCAAGAAACCATGATGAAATTGACATTGAGTTCCTTGGTACCACGCCAAATAAGCCATATATATTGCAGACAAATGTGTTCATCAGA GGAAGTGGAGAAAGAAACATAGGAAGAGAGATGCAGTTTCACCTTTGGTTCGACCCTACACAAGATTTTCACAACTATGCTATTATGTGGAAACCCAATG AGATCATGTAATATTTTTATCATGCAGTATCCCAATGTTTTAAATTGCCGGTTACTGTCGCGATTGCGGTTATTGCCACTGCGGTCATTGCAACCGCTGC GATGTGGATTGCGGCTGTTGCGGTGTGAATTCATTTGTGAATAAAAACATATTTTTGACATCGATATGGTCTGATGCGGCCCGATGCGATTGTGTTGCGG CTCGATGTGGTCCAATACAATTGTGTTGCGATCGCATCATGTGATGTCGTCTACACTATCCTACCACTATGCTCATAATTTTATAAATTTCAATGTATTT TATACCATATTCAAATGTGGTCCTATTTCATTTTCACTACTTAAATCATACGTATTCTTTGATCCTTCCATGATAGAGAGCCTCCGATGATCCCTCATAT CCAATATCTAATGTGTAATTTCACACTTCAATAAATCAAACACATACTTTCTATGTGATAATATCTAGGGGAGTGAGAATATTTTCCACTAGAGAATACT AATCATGAAAAAATTGTGTTGCTTATAATTACTACTTTTTGTCTTATAAAGGAAAACATTATGTGCAGATTTTTAGTGGATGATGTCCCAGTGAGGAGTT ATCCTAGGAAGAGTGATGCTACATTCCCTTCAAGACCAATGTATGTGTATGGATCAATATGGGATGCATCTTCATGGGCTACAGAAGATGGAAAATACAA AGCTGATTATAAATACCAACCCTTCATTGGTAAATATACAAACTTCAAACTTCAAGGTTGCACCAATGAAGCCTCCACCTCATGCAAGCCACCCTCCGCC TCGCCATCCGGCGGCAACGGCAGCCTTAGCACTCAACAGCTTGCTGCAATGCAATGGGTCCAAAACAACTACTTGGTCTATAACTATTGCCATGATCCTA GGAGAGACCATACACTAACCCCTGAATGCTAAGGTTTGGTACACTTTATATGGTTCAAAATTACTACCTTATACCAAAACAATTTAGTATGTATTTGTGT ATATTATTACTGAAATAATTCGACAACATTCTTGAAAATATTTACAAGAATATTGTAATATTCTATCAATTACTTTGGTCATTTTCATATTGAAATAAAC GTGTTTGGATACTGTCCTAATCGGCAGTGAAAAATGGACATTGTTCCCTTGAGAGTAAGCCGTTTGAAGGAATCTTCTCATGGTCTTGTTGCTGAATTGG ACCACCAAAATAATTATTCAATCCATGTGATGTGATGTCACTTATGAAAAATGTTAAATCCTCTTCTAACTTTATAAAGTGTATGTATTTCATAATGTAA TAATTTTAACTACTCATTATATTATTTTTTTCATTTTTGCTTGTAGAATACAAAATAATGTATCTTAGAATAACCACCCAACTTCCTCATACAAATCTTC ATTAAGGTATAAAATGTTTTTTCTCAACATTCCAAAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_160964; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_362929
| Blastp | Probable xyloglucan endotransglucosylase/hydrolase protein 32 from Arabidopsis with 68.33% of identity |
|---|---|
| Blastx | Xyloglucan endotransglucosylase/hydrolase protein 31 from Arabidopsis with 76% of identity |
| Eggnog | xyloglucan endotransglucosylase hydrolase protein(ENOG410YDGS) |
| Kegg | Link to kegg annotations (AT2G36870) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_003597276.1) |
| Pfam | Glycosyl hydrolases family 16 (PF00722.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |