Ll_transcript_362102

• Id Trinity: TRINITY_DN48486_c3_g3_i1
• Name Transcript: Ll_transcript_362102
• Sequence: ACTTGCTCCATGCATAGCAATAATTGCCTTGATTAATAAATAAAAACAAGTTGAAAGTTAAAATATCAACATCAGTGCATCTGAGTTTCTGTGGTTTTCC TTCCATATAAGTACATGATTTTGGATGCTAAATCAATCCACACATAATAACCCCACATGTGCAACTACTTCATCCTTTTGAACTCACCATACAAGCAAGA TGAGAAGCATTTCAAAGACAACATGCTTCATTTTCATTCTTATAGTAGTACTAACAGCAGTTCAAGTTGAAAGCCGTGTCCTTGGCATAAGTGCTTCTGA ATTGGTTTATGATGGAGTTGATGATGTTAAAAATGAAAGTTCTAATCTTTACCTCAAAGGGAGTGAGCCCTCTGGAAAATACTGTGAGCAAATGTATGGT TTCTTGCCATGTTCAACTAACATTTTGGGTCATCTCTTTCTGATTTTGGTGTATGAGTATTTGTTATTCCATGGAGAGTCATACTTGGCTGCTGGTGGTG AACAAGTGTTCAAGATTCTTGGCCCTGGCATTTTTGGTGCTAGTGCCTTTGATATCCTTGGTGCCCTTCCTGAGTCTCTAATTCTTCTTGTTACTGGACT TAACAGTGATAAAGAAAGTGCACAACACTATGCATCCAATGGAGTTGGCTTGTTGGCTGGATCTTCCATTTTGCTTTTGACAGTAGTTTGGGGAACATGT GTTATCATTGGTTGTGAAAAGTTGAAAGATGACCCTAAATCTAGTGGGTCTAACACCTCCAATTCATCAAATGGAAGGATAAAAGAAGCATTGACTGGTT CTGGCATTATTGTGGATATAGATACTGTAAAGATGTCAAGAATGATGGTTTTCTCAGTTATACCACTCATCATAATGCAGATTCCAACTTCATTCAAGCT ATCTCCCACACATTGTGCTGTCGCCTTGATGGTTTCTCTTATCGTCGCCGTCATTTTTCTCATCTCCTACTTCATATATCAGGTTTTCAAACCTCACATA GAGAAGACAAGACTAGAATATATTAAACATGACGATTTAATATTAAGGATATTTCAGCATGTTGAAAAGCAAACTCTTCAAAAGATCCTCACTGAGGATG GAACCCCTAATGTTACAGCCATAAGTGGACTATATCATGAAATAAGCCGACACGGGGACAAGGACTTGTTGGCTTCTGAAATTAAAGAGCTGCTGCTTCA GAACAAAGAAAATGGAGCAAATATCAAAGAGGAACAAATAGCAGGCATGTTAAGAATTTTCGACCGAAATGGCGACCAAGTTATAACGAAGGAAGAATTT GTGGTAGGCTTGACAGAATATATTAACCAAACAAAGCATGCTCTGGACAGGAAGTACCTCCCAAAAGAATCAATGAACAACTTGTATCAGGTTTTTATCA AGCCATGGATTGAACATACCAGGAGAGAACGTGAATTGAAGGGACATCTTATATCTGAAGTGTTAAGGCATGCTCAGAACGATATGGTTGGAAGTCTTTG TAAAGATGATGGTACACCTGATGAAGCTACAATAAGAAGGTTATTTGAGCAAGTTGATAGCAATGGAGATAATCACGTCTCAAAATCAGAGTTAAAAAAA TTAGTCAAGGACATTCATCTTGGTAAGGTTGCAGATTCAGAGGAGGCAGTTGCAAAAATCGTTCACGAACTTGACCTTAACAGAGATGATGAAATCAGTG AGGATGAATTTGTTGTTGGATTTTCAAAATGGATAAACAGAAATTCCAGTCAAGCTCCCCACTTAATTGCAATGCCTCATGAAAATCATCAAACCTGGGA AGAAGTTGAAGAAGTGATGGAAGATAATCAAATCAAAGGAATAAATGCTTGGTTGAGCGCTTTAGGATATGTGATGCTGGGAATTACTATGTTATCTCTT CTTGCAGAGCCCTTAATAGACAGTGTCGAAAACTTCTCTGAAGAAGCCGGAATTTCATCTTTTTTCATCTCATTTATTATAGTCCCCATTGCTACAAATT TTAGAGAAGCAACCTCAGCTATCAAAGAAGCTAGTCATAAGAAGAGAAGAAACACTTCTCAAACAATTTATGAGATTTATGGATCAGTTTTCATGAACAA TATTCTTGGCTTTGTGGTGATCTCCAGTCTAATATATATGAGAGATATCACTTGGGAATTCTCAGCTGACGCATTGGTTGTAGCAATTGTATGTGCTGCG ATGGGCCTCACTGCGAGTTTTCGCTCCACTTTCCCTCTATGGACATCTGTTCCTGCATATGCCTTGTACCTAGCATCATTAGTTTTGGTTTATACTCTTA AAGATATTCTGCATTATGTTTAGTGACTGAGTTTTGAGCAAGCAGAACAGATTGACTGATAAGCTGTGAATGCAAATAAAATTGTGTCTGTAATTGATAG ACGCATTTGGCCGACCTATTGAAGCAGTTAATCA
• Tissue: pods
• Gene name: LI_gene_161461;
• Additional information: details;

Expression of Ll_transcript_362102

FPKM

• PAB: 1.2
• PNAB: 8.6
• PS1: 14.1
• PS2: 10.4
• PS3: 19.7
• PW1: 4.4
• PW2: 3.3
• PW3: 3.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_362102

• Blastp: Sodium/calcium exchanger NCL from Arabidopsis with 35.84% of identity
• Blastx: Sodium/calcium exchanger NCL from Arabidopsis with 35.59% of identity
• Eggnog: Calcium-binding EF hand family protein(ENOG410ZVKW)
• Kegg: Link to kegg annotations (AT1G53210)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449181.1)
• Pfam: Sodium/calcium exchanger protein (PF01699.23)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;