| Id Trinity | TRINITY_DN48498_c0_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_362126 |
| Sequence | ATTTGAGACTCGGTCTCCCTCTACTTTGATTCTTTTCTCTTTTATTCAACACACAAGTTGTGGAATCCGAAAACAAACTCCATTTCCAACTCTTTCTTCA TTCATAAGCATAAGCAGAGATGGCGAGTCGGTTGAAGGAAGAAGAGAAAAACGAACGCATGATTCGAGGACTTCTCAAGCTTCAACACAATCGTAGATGC ATTAACTGCAACAGTTTGGTTAGTAAGAATAACACGAGAACTCGCGAGTGTTTTATCAATGAAATTGAAATTTATGCATGCTTAGACCTCATTTATTGTG TTAGATTCACCTTCGATTATTTAGAAGTTGCTTTAAATGGATTTCTACTTAGTTCAAATTTGAAAATAGGTGGTTTTAAGTTGGATTCGATGTTGCGGTT ATATTGTGTTTAGTGCAATTGCGGATAATTGCTAACCACAGTGTAAAACCTGCATTCAGGGAAGACCATTGAACTTGAAATTAATGACACTGTTTTTTTA TCTGGTGTTATATTATAATGTACTGGAGTGTGGAGAAATTCTAGCTTGCTCATGGAGTAGCAATAAATGCATGATTAGGAAGATCTATACCAATGATTTA AGTTGGCTATTTTAAGCTTTTATTGAAACGTGCTTAAAATCAATGGTGAAAATCTTCCAAGAGCATCCGGTTTATCGTTGCTCCATGATTATGCTAGATT TTCCCGGAATGTCGTGTGCAGCAGTAGTGATAAAGAAAGCAAAAGCATGATATAATTTCACATGTTTTTGGCATGTGAATCATTAGAATCTTTAATTTAA GTTGGTGGTTGAAAATTAGAGTACGGAATTAGATATTGTGATTACTTAATGTGAGGTCTTACTTAATTAGTAACATAATCTTGACGCGTGGCGTTTTCAT TTTAAATTTTGGGAATGCACCATTTCATTTTATGAAATTGATTATCATTCGGCAAAACTACAGATTAAATATTATCCTCAAATTTCATGCATTTGTCTTT GGGAAACACTGGTTTTTTTGTGCTATAAGTGCATATTTGGCATCATAAACTCTTGGAGATGAATATTTATTTTGTATTTGAATAATTTTATATTAAAAAA AATAGCTAGATGAGCTTATTCGGGCAATCATGCTCTTATTGTTAGTATTAAAATGAAAAATAGGCTGTTGAGAATTAGTTGTTTCACTTGTTGAGATATT TCAAATTTGCTTAAACAGTTGTTTGAAGAGCACTTCTGATGAGTACAGGGTCCATTTGGAACTAAACTATTGTTGACTATATTACTGAGCATTTTAGATT TAAATCACAAAACAAGTTCTAAATAAATCTTTTGGTCCAAGTCCAACGAACAAGAATGAAAACATTTCTGATGCTACTTTAATCATTCAGTTTCAAGGGG CTAAGTTAATTTTTGTAATAATCTAAAAGGCCTCCAAGGAAGGTTTAGAATATCTACTTCTATAGTACAAATTGGGAGATTATTATGAATAATTTAAAGT TTGCTATTGAATTATTTAAGGATGTGTTTAAGTTGCATGTTCCTTTGACTTTGGAGTGATATTGGGATATTTTTAAGAATGATTGCATGTTTCTATTATA GGGCAGTTAACATGTAAATTTGGTCAACTGTCAGATTCTGTATCAACCATTGTTAGAGATAGATTTCATTTCATCCTTGACAGACAGAACAATGTTTCCA TTTGTATCTAATAACTTGCTTGTAGCCTGCAGACTACCAAAATTGCAAGGATGATAACAATTAACAGCATCAAGCAACTATTGATACTTCTTTAGATTCC ATTAAAAAAAAGAACCTTTAACGATGAGATAAATTTTAATCTTTGCTTGAATTCTTTTGTTAGGCATATTTGTCATCATGTTGTAGACTTTAACTCATGT GTTGTTAATCTCCAACCACCTTTCAGAGCATTACGATTGCATTCTTCTTAACCTAGGAAGGAAACTTTGGCATTTGACATTGACAGGTGTAGTATATTAC TTATTCTCTTTTCTCTTTTGGAAGGGACCACAATATGTATGTACAAACTTCTGGACGTTTATTTGTGCAAACTGTGGTGGAATACATCGGGAATTTACAC ATCGAGTAAAATCCATATCAATGTCTAAATTTACTTCACAAGAAGTTAAAGCACTTCAAGAAGGAGGGAATCAGCATGCAAAAGAAATTTATTTTAAAGA ATGGGATGCCCAACATCAACCTTTCCCTGATAGCAGAAGTGTTAACAGGCTCCGTGACTTTATCAAGCATGTTTATGTGGATAGAAAATTCACTGGAGAG AGGACCTATGACAAACCACCGAGAGTAACAATGGATGACAAAGACGATTCCTATGAAAACAGGAGAGTTGAGACGAATCAGGGAGGATCTAAAAGTCCTC CATATGAACGTCAATATGATGACAGGTCTAGTTCGGGTGGAAGAAGTCCTGGATATGATCAAGAAAGTAGGCAATATGGTGATTATAAGAGAGGTTCTGG TTACCCTCCTGTAGTCAATGATTGGCGTCATGAAGATCGTAGAATATCTGAGGAAAGCCAATCTCCTGAGCGAACCAATGACTTGGATTCTTCAAGCTCA CCTGTGGTCCGTCCTGTTAGAGATATTTTGGGAGAAAATATATCACCTCTTCGGATAAGTGAACCTCCTAAACCAGACAGTGGAGTAGCTGCTTATGGCT CAGCACTGACACAGAGAACTGCATCTTCCAGTAGCTTGACATCCAACAATGCAAACCCAATGCCAGAAGATGTTAAGCTTGAGACTATAAAGAGCCTTAT TGATTTTGATGTTGATCCTGAACCTCCTGCTGCTCCAGCAATTTCTCAAGCTGAACAAACTAATATGTCTCAACCTGCTGTGCAGCCAGCAAATCCCAGT GATGACAACTGGGCCTCTTTTGATGTTGCTCCTGGGGCAAAAGCAACTCCAAGCCCTGCAAATATAAATACTCTTGAATCTGTGCTGTCTCAGTTGTCAG TGTCAGCATCCTCACCTGCTCATGTTCCTGGAGTCCAAGGAGCTGGTCCAGCATCATCTTTTACTTCTGCTTCTGGACCTGCTAGGGCTAGCAGTTTGTC AGCTTTCCCACAAATTGGTGCTTTAGCATCATCTCCTGGGTTTACAACAGTATCACCTCTTAATAATTCAGGACAGTGGGCCAATTTTCAGCATCAACAA CCATTGTTCCCTGTCACTGTGAGTCAGTCTACTACTCAACAATTTACACCACCATTTGGTAGAGCTGTGAATAATCAGCCCTGGAATGCACCTTCTGTAC CCATAGTACAAAGACATCCAAACACACCAATGCCACGTGCATACCATCATGCCTCAAAGCCCGCCAATGAGACTATATCCAGTGTTGTTTCACAACCTTC CACTGTAGAAGTAAATCCAAGTGCAAGAAAAGCGCTCCCTGAGGATTTGTTCACTGTAAAATATTCATCCTTCCCTGCTCCAGTTCGAGGTTGGCAAATA GGTCTTCATCATGGCATGGGTATCCCAATGCAATATAATAACGTGGTGCCCGTGGCAAGTTTTCTGCAGCCAACAAGATCAACGAATCCATTTGATATTG GCAGTGAGCAAACCCCAAATCAAGCCCCAACTGTATGTCTTTTATTGAAATAAAATACTAATGTGCACTATTGCCAATAATAGCTCATACTTCATACTCT TGTCGATGTCTGGTGGGTCATGCATGAGTATTGTATTATATATGCATATACATATTTAATATTGTTATTTGAGGATTTTGCTCCTTTAAAGCGCATACTT GTGGAAGATAAATGTCATGGTTTGGATTTGTCCACTGGTTCTTAAAAAAGATAATTGTGGTTGATGCTTTTCTGGTTGGTATTCCTTGGATGCAGTTTCC TTCCATGTCATCCTTGCAAGGTGCTCTGCCTAGTGTAGCGCCTTCTGTTTCAATGCACCTTTCAGGCCTGAGTTATCCATCAAATGCCTGGACTCTGCCT CCATCATCATCATATGTATCAGTCCTGCCTGCACAAGCACAAGCACAAACTCATGCATCAGCTTTTGGACCAAGTATTTTTATTATTTTACCTTCAATTA ATTATTGTATGCTTGGGTTATTTTCTTTTTAATTTTTTATTGTACCCTGGACAATGTGAAATCTCAGGGGCATACATGGGACAACAAATGCCAACCAACA TGGGACAACACGTCCCACTTAACATTCCAATACCAAGGCAAGAAGTTGGTAATTTTGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_161562; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_362126
| Blastp | Probable ADP-ribosylation factor GTPase-activating protein AGD14 from Arabidopsis with 47.06% of identity |
|---|---|
| Blastx | Probable ADP-ribosylation factor GTPase-activating protein AGD14 from Arabidopsis with 55.73% of identity |
| Eggnog | ArfGAP with FG repeats(ENOG41122WA) |
| Kegg | Link to kegg annotations (AT1G08680) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019436655.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |