Ll_transcript_339186

• Id Trinity: TRINITY_DN48523_c1_g2_i17
• Name Transcript: Ll_transcript_339186
• Sequence: AAAAAAGAAAGCCTTTTTTCAGTGAGGGAAACATGCCCAACTTCAACCCAACACTTTTACTACTTCTTACCACATCCCAAAGATTCTAAATTTTAAGTAA GGGCTATGTTGAACTTGAAGGTTACATGAAGCCGTTTCTCTTGTTGAATCATCCGGATACTGTGCTTAATAGTGGACAAGTTGATTCTAACCACTCAATG GCTCATGCTTCTTATCCTCACGGTGATCCTTTTTATGATGGTTCCTTAGCTGCTTATGGACCACAGGCAATTAGTCAATCTCAAATGTTGCCTCAGATGC TGGGATTAGCTTCCACCAGAGTAGCATTACCACTTGATCTTGCAGAAGATGGGCCCATATATGTCAATGCGAAACAGTACCATGGCATACTGAGAAGGCG ACAATCACGAGCAAAGCTTGAGGCTCAAAACAAACTCATCAAAAGTCGTAAGCCATATCTTCATGAGTCTCGGCATCGCCATGCTGTGAATAGAGTTAGA GGATCCGGGGGACGCTTTCTGAGTACCAAGCAGCTTCAACAGTCCAATGCAGGACATTGCGCACATTCTGGCTCAGATCCTGTCAACATGTATCAAAAGA ATGATACAGTGGAAGTGGAAAGTCGTCCCACAAGAATCGGAGAAAATGCATCTTCCATCACTACCTGCTCTGACCGGACATATTTATCGAATAACAACTT CAATTTTAGGCAGACGGAGCACATGTTCCTGGGGAACTCTACAAACATAGGAGAGGATCACAGTGCTAGTGGACTCACCTTTGGTGGAACACAGCAGCGC GCTCCAGTTGTCCGGTGAGAGGCGGATCACCGGTTTGGCAATTCATCCTTGGCTTAGTCAATTTACTTTCTACGCTTTTACACGATCTTACAAAAAAAGT CGTCCTTTGAGAAACCGCATAAGCACGAAGATCATTCCTAATTCCGAGTGCTTTTCCGTGTATTCTAAAGTTGCTATGATGTGTTGTTACAAAAAGGTTC TGTTTTGAGAGACTCTGCATTAGCACTGAGACATTTTCTGGTGCATTGTTGTGTATTTTGAAGTTGTTATTGCTTATACACTAGCCTGAAGACTTGAACT GGATCAGACATCAGAGCAGTGATATCATATAAGTTTCTGTGATATCTATGTTCTTTCCTAAAGTCCTTGCTTTAGAATATTACATTGCTTGTAGTGGATC AAGTTGTTGAAAGTGTAATAGGTTTTGTGTTTCAGAAATGCTTACATTGCAGGTAAAGAAGGAATGAAAAAGGAAGGAACACAAACTTTTCCATTGTTTG GATGACGAAAATGATGGGACCTTTTGTTTTCTGATATTGGGAAGAAAATTCAAGAGAAGAAGATTAGGGACAGATTTTCTCGTCGCTAACTAACTCTTTA AACACGGAAAAATCTGTATTTTGTGTTACCCACATTTATAAATGTTGCTAATTTCCTAAACACTCGAAACGAAATGACAAATAATGTCATTGTTAAAAAT AACTATAATTTTC
• Tissue: pods
• Gene name: LI_gene_161776;
• Additional information: details;

Expression of Ll_transcript_339186

FPKM

• PAB: 0.6
• PNAB: 3
• PS1: 4.1
• PS2: 11.3
• PS3: 3.8
• PW1: 2.5
• PW2: 1.4
• PW3: 1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_339186

• Blastp: Nuclear transcription factor Y subunit A-3 from Arabidopsis with 47.09% of identity
• Blastx: Nuclear transcription factor Y subunit A-3 from Arabidopsis with 47.09% of identity
• Eggnog: Nuclear transcription factor Y(COG5224)
• Kegg: Link to kegg annotations (AT1G72830)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415530.1)
• Pfam: CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B (PF02045.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;