Ll_transcript_337578

• Id Trinity: TRINITY_DN48537_c2_g1_i11
• Name Transcript: Ll_transcript_337578
• Sequence: TGTTAGTAAGAGATAATCATGTGGAATGTTTACTGACATACGTTGGTTCAAGTGGTACATGCTTGATTCCCTTTAAGCAAAGTCGCGGTTCGATCCGTAT GGATGTAAAAAATATCTGCTGAGAGAGTTAGTTTCATATACATATAAGTGGATGTTTCCGGATCGGACAGGATACGAAAAAAAAACACGTGGAATGTTTA GATACCAAATTTGTTGCATTCACGCCTCTTAATTTTACATCAATTTATATTTCCATTCTTCTTTTTCATTCCATCTTATCTTTTTTATTACACTTTCCAA CCATGACAATTCCCTCTTCTAACAATTCTGATGATGATGTCAAGAATGCTATGCCTTCATATTTTAATTTACCAGCACTTGATATCTCTGTGGCATTTCC ACAAGCAACTTCAGCCTCAACATTTCCTCCTTGTGTTTCAGATTATTTTCAGTTAGATGACTTATTGACACCAGAAGAAAAATCCATCAGGAACAAAGTG AGAGACCTTATGGAAAAAGAAATTGCTCCTATTATGACAGAGTATTGGGAAAAGGCCGAATTCCCATTTCAGATTATTCCGAAGATAGGTTCACTGAACA TTGCTGGTGGTACAATCAAGGGTTATGGTTGTCCCGGTCTTTCTGTTACTGGAGGTGCTTTAGCTGCAGCCGAAATTGCTAGAGTTGATGCAAGCTGTTC GACATTCTTTGTGGTCCATTCCTCCTTGGCAATGCTTACTATAGCGTTGTGTGGCTCGGAAGCTCAGAAACAAAAGTATCTACCTTCTTTGGCAAAGCTG CAAACTATAGCATGTTGGGCTTTGACTGAACCTGATTATGGAAGTGATGCTAGTGCTTTGAATACCACAGCAACAAAGGTGGAAGGAGGTTGGATCCTTG ATGGCCAAAAAAGATGGATAGGAAACAGTACATTTGCTGATTTGTTGGTTATCTTTGCTAGGAATACTACAACAAATCAAATAAATGGGTACATTGTGAA AAAGGATGTACCTGGTTTAACAGTCACAAAAATAGAGAACAAAATTGGACTTAGGATAGTACAAAATGGAGACATTATTTTAAGGAAAGTGTTTGTCCCT GATGAGGACAGAATAGCAGAACTCAACTCTTTTCAGGACACAAACAGGGTAAGATTGTGTATGCATTTTTTACTCCTTCTGTTACTTCAATAGCAATTAT ATATCATTTCATCATTTAAACAATTAATAACTGTTATATATATATAGCTATTGCCTACTATAAACTTATGAAGCATTAGACCATTTCTAAATCTTGGTGC AGATTTACTTTTAGAGCCACTTGATGTACCTTCACAGTATTCTCTGTGTCTCATAGGTTATGAGCAGCATCTGCATTTGTCTGGTTCTACAGCCATCAAT GTTTAATATGCATGTTACTTTCATTTTGTTACTGTTAAATATTGTCATATCTGATTTTAAAAACAAGAAGAATCTAGTTTTCATTTTCCTTTCTCTATGC ATTATTAGTCCTAAAGAGAAAAATGATAGCGACATGCCGACACTATTTTTAGTAAATTTTCAGCAACACTGCTTCGTTTTCTATTTAGCCGGTCTCGCAT GAAATCCATCCAATAATAATGTTAAAGAAAATGTTGAAAAAGACATGTTAGTATTGCTCTAGTATATTATTCTTGGCCTCCATCAAATCTTGCTTGAATA TAAAGCCATTGCCAGACCTTAAACTAACTCCATTATTGTATCATTGTATTTTGCTCTCTGCCTAGCAGCAAAAGGATGTATTGTTGTTATTGTTGTTGCT GCAATTTTGTATATTGAGTGTAATACCGTTGTCAATGTAAAGATTTATACACAGTCCTACATTATCCACCATTCGTTTAGATTATTTTTATTTTTTTAAG AGTCAATGATGATTAGATATGAATGGTAATGATGCAGTGACAGTGTATAAAATCCATATACCGTCAGTATATATTTTTTTCGCTTGTATTTTTTGTGTAC AATTTACATGTTGGCTCATTTTTTATCTCAAAACAGGTACTTGCCCTTTCTCGTGTAATGGTTGCTTGGCAACCTATTGGTGCATCAATGGGCATATATG ATATGTGTCATAGGTACCTAAAGGAAAGGAAACAGTTTGGAGCACCATTAGCAGCTTTCCAAATCAACCAACAGAAACTTGTTAAAATGCTAAGTAATGT TCAAGCAATGATCCTTGTCGGTTGGCGCCTATGCAAGTTGTATGAGAGTGGTAAAATGACTCCAGGTCATGCTAGCTTGGGAAAGGTAACCTTGTAACTT GTATGATAATGTATCACATTTGCTACACCCTTTCACCATAGCATGAAAAATAGTAATCAAAATGCAAGGTTTGTTTGACATAATTACATTCGAGTATTTG ACACTGCTTTTGTTTCATTGTACTTGCCGGATATAACTAAGCTTAAATCTCAGGGAGTGTTACTGTAATTTTATACATTAATTGCGGTAAGTAATCGACT AACTAGTTGTCATCATTTTTCAGTCATGGATCAGTTTGAGGGCTAGAGAAACAGCTGCCCTTGGGAGAGAATTGCTTGGTGGCAATGGAATTTTGGCTGA TTTTCTTGTGGCAAAGGTTCTCATGCATAATTCCTAATTTACATTTTTAAAGCCCATTTTGTTATCTTGAAAAATTGGATTTCTCATGACATCATGTGAA AATGTCATATAAAAGTTCAGTGTGTAAAGATTTATACACAATCAGTTCTGCAATTTTTTCTCGTAAAAGTTCTACTTAAGAACCAAGCATGAAATCTATC ATAATTAATATATACTTGAAGAATATGTAACTTCTACACATGTTATAAGCACTTATATACATAACAATTGCTAGAGATTAAGATCATAATATAGCATAAA TAAGACCATTTTGCATTCTGACATTTTTTTTGCTACTTTCTTTCTCATATGTTGCAGGCATTCTGTGATTTAGAACCTATATATACCTTTGAAGGCACAT ATGATATCAATACATTGGTCACAGGAAGAGAAGTAACTGGATTTGCTAGCTTTAAACCTGCTTCCAATAGAAGTAGAATGTGAAAGTGTAAAACTACTCA TCTATAACTCCACGATCCATTGGTTAATAATTTTTACAACTGTGACAAATAAAAATTCATATGCACTCAATCTTTATACAAATTTTGGTGTATATGACAA TATAGTAAAGTAAAAAATAATGATCCTGTATTGGGCATTGAACAATATACAAAAAATAAAACATAGTATTTGCTTTAGTCTTTATGAATGTTACCATGTT TCACTTGTGATATGATTATTAAACTTTTGTTTTAAAAAAAA
• Tissue: pods
• Gene name: LI_gene_161879;
• Additional information: details;

Expression of Ll_transcript_337578

FPKM

• PAB: 0.9
• PNAB: 0.1
• PS1: 0
• PS2: 0.1
• PS3: 0.1
• PW1: 0
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_337578

• Blastp: Acyl-coenzyme A oxidase 4, peroxisomal from Arabidopsis with 74.2% of identity
• Blastx: Acyl-coenzyme A oxidase 4, peroxisomal from Arabidopsis with 74.2% of identity
• Eggnog: acyl-CoA dehydrogenase(COG1960)
• Kegg: Link to kegg annotations (AT3G51840)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019450332.1)
• Pfam: Acyl-CoA dehydrogenase, N-terminal domain (PF02771.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;