| Id Trinity | TRINITY_DN48542_c2_g2_i7 |
|---|---|
| Name Transcript | Ll_transcript_337354 |
| Sequence | CAACACTCAAGTTACATATTCCATATTATATATATCGCAACAACGACTCTTCCCTCCTTCCCCAACATACCCATACCTATAGCCACCATTTTTTTGGGTT CTCTCCAACATGACAGGAGAACACACTTCACCACCTGATTCTGATGCCCTTAAAGCCCCTCTTCTGCCACTTCATCAACATATCCAAACAACATACACAA CCCACTTAAACATCAAATCTGTTCTAACACTTCAAAACTTCTATGTCATTCTAGGACCCTTGTTATCCCTTATTATATGTCTCTTTGTGAGCCTTGATGC TCCTGTAACAAGTAAGAAAATGCTTGCTGTACTTGCTTGGGTTTTTGCTTGGTGGGTCACCGAGGCTGTGCCACTTCCTGTGACATCTTTGTGCCCTCTT TTTCTGTTCCCTCTCTTTGGTGTAGCTACAGCTGATAGTGTTGCTCATTCTTATATGGATGATGTTATTACGCTTGTTTTGGGAAGTTTTATTCTTGCTC TTGCTGTGGAACGATACAACGTACATAGAAGATTGGCCCTGAATGTAACATTGTTGTTTTGTGGGGAACGTTTGAATCCATCGTTGCTACTATTGGGTCT ATGTGCCACAACATTCTTCGTCAGCATGTGGCTACACAACGTGGCAGCCGCGGTGATGATGATGCCGGTAGCCACCGGCATCCTCCACCGTCTACCACCA CCTCAAGAGCAATCCAACACCGTGAACAAGTTCAGCAGAGCAGTTGTACTGACGGTGGTGTACGCTACACCCATCGGAGGGATGAGCACTCTAACAGGGA CAGGTGTGAATGTTATATTGATTGGGATGTGGAAAAGCCTGGCACCCGATGCAAAGCCCATCAGCTTCAACAATTGGTTTTGCTTTGGTTTCCCAGTTGC TGTTATTATGCTATTGTGCTTTTGGTGTATCATATGTTTGCTTTATGTGAAGAAAGACTCGGGCCGGGCTTTGTCTTCTTATTTGGATAAAGCCCATTTG AAAACAGACCTTGAAGCTCTAGGTCCAATGGCTTTTGCTGAGAAGATGGTGTTGCTTGTGTTTGGGTTGCTGATCTTACTATGGATGACAAGAAACATTA CGAATGATATTCCTGGATGGGGAACTTTCTTCCATGGCTATGTTGGTGATGGAAGTGTCAGTGTAAGTGATGCGCCTACTTAATTTTAGAGTTTTTACTT TAGTTCTTTCACACAAAAATTGACCTTAATGTCTAATTTGAAAATGGTAAACACACTAATAATAACATAAAACTCAAAAAGTCAGTCCTTATTAGTTGAT ATTTTATAAAATGTAATTATATCAAAATGGAATACCATTGTCATTCATGAGGAAAAAAATTATGGTCTCTGCACGGATTATAATTTCCACTTATCATTTA TCATTTTAGAGTATTACATTATTGACTTTTAAGTAAAATAAAATAGTTTATAATTTTACATATTGAAAAGTGGATAATCGTGAATAGTATAAAAACTGAA ATTATGAATATACACTCATGAACATTATAACAAGAAGTCATTTAAATAATTAGTCAATGATGTTTCATGAATGTAAAAATTATATGATAACACACATCCA TTAAACTTAAGTTTATAAATTAACTCCTACTTTCATCGCTATCTATTTGTCCACTTAAGTTTTTTCTATCCGTGTTCATTTAAAAGTTAACATGTGTATT AATTGTTATTTTATATATTAGTTTTATATAAGATTATCTTGATTTTGTTTAAGTGGTGAAAAATCTAATAAAAACATAGAGAGAAATGATATATTAGGGA AACACCATAAATGTAAATCAACATAATCATTATATTTCCAAAAGATATATTTTTGGAATGAGAATAAAAATGAAGGTATTATTATTCATGTATATACTTA TACATGTATTTAGGTAATAAATGTATTTAATATTTTAAAGTTATATTCATTTCAGATTTGTTAGAAGACATTGACTTGTGTACATGTAAATCAATCAACA GAATTGTGGTTATTTATAATGGTATAATAAAGAATAAATAAATAGTTTATATAAATTCAATACAAGTGATTATATTTTACTGGTTAGAATGTCACGTCTT GGCCGTGGGGTCCTAGGCTCTCAGTTCCTAGCATCCACATAAATTTTATATTTTCACATTTTGCTTATTGAAAAATCTCATTGAAGATACCCATCACCAA CTTGTTTGATTA BLAST |
| Tissue | pods |
| Gene name | LI_gene_161940; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_337354
| Blastp | Tonoplast dicarboxylate transporter from Arabidopsis with 61.11% of identity |
|---|---|
| Blastx | Tonoplast dicarboxylate transporter from Arabidopsis with 61.11% of identity |
| Eggnog | Transporter(COG0471) |
| Kegg | Link to kegg annotations (AT5G47560) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419392.1) |
| Pfam | Sodium:sulfate symporter transmembrane region (PF00939.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |