| Id Trinity | TRINITY_DN48570_c5_g3_i7 |
|---|---|
| Name Transcript | Ll_transcript_337175 |
| Sequence | TAAAAATAAAAATAAAAAATGGGTTGAGTTGGGTAATTAGATAATGAATAAATTTTGAACGAGATTCGGAGATCGAGAGAGAGAATCGGAGAATCGGAGA ATCGGAGAATCGGAGAATCGGAGAATCGGAGAATCGGAGAATGGAGAGTTTACCAGTGACAACGAAGAACGATCATCATAGGAGAGGAGTAAGATCAAAA GGAATTCAAACTTCTTCTTCTTCTAAACCTTCTCTAATCATGGCTTTCTTCTCTTGCGTTGCTTGGCTCTACGTTGCTGGCAGGTACGAATCAACATTCT CTTCATTTTCAATTTCTTCATTTCATCTTCTTCTCTATTTATTTCATAGGTTATGGCAAGATGCAGAAAATCGAAACTTACTTACTACTCTACTCAACAA CAACTCTGCCAAGAGGCCAAAGGTTCTAACTGTGGAAGATAAGCTAGTGGTGTTAGGATGCAGAGATCTAGAGAGGAGGATTGTTGAAGCAGAGATGGAT TTGACACTGGCAAAGAGCCAAGGTTACCTCAAAGGTCAGCCACAGCAGAATCCTAGGCTTCTCGCTGTTATCGGAGTCTATACTGGATTCGGAAGCCGAT TGAGACGAAATATTTTCAGAGGCTCTTGGATGCCAACAGGTGATGCCTTGAAAAAACTCGAAGAAAGAGGAGTAGTTATCCGTTTTGTGATTGGTCGAAG TCCAAATCGAGGTGACAGCTTAGATCGCAATATTGACCAGGAAAACCGCTCGACAAAGGATTTCATGATTCTTGAAGGTCACGAGGAAACTGAAGGAGAG TTGCCTAAAAAAGCAAAAATCTTCTTTAGTACTGCAGTCCAGAACTGGGATGCTGACTTTTATGTGAAAGTTGATGATGAAATTAACATTGATTTGGAGG GTTTAATTGAACTTCTTCAACGTCGCCGAGGTCAGGATGGGGCATATATTGGATGCATGAAGTCAGGACAAGTGATATCAGAAGAGGGAAAGCAGTGGTA TGAACCCGAATGGAGGAAATTTGGGGATGAAAAAACGTATTTCCGACATGCAGCTGGTTCACTTGTTATACTTTCAAAGAATTTAGCACAGTACATTAAC ATCAACAGTGTATCTTTGAAGACCTATGCCTTTGATGATACATCATTGGGGTCATGGATGTTGGGCATCCAAGCAACTTACATAGATGACAGTCGTCTTT GCTGTAGTAGTATCACACAAGACAAGTTATGCTCCTAATGGTGGAGTGTGATGATTTCCTTCAGTACTTTTGGTGAGGAACTTGTACAATTTGTCCTAAG ATCAGCGTGGTTGAAGATTATTCACTCTTTTCAGTTACATCCAGTGATGCCTATTTAGATACGGTCACCTTTCCATTCTTTATATTTTGAGAAGTGCTGT GATCATAGTTCTTCTCACTTCTTGTCTATACAAAATTTGACCATCAAATATTAAAGAAAAATCAGTTGTGCTTTTAATACACAGCATAATGTATGGTATA ACTGATGACCAAATTTCAGACTTCGTTAACATGAGGAATGCATTGAAATTTTTGCAGCAAAAAAAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_162190; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_337175
| Blastp | Hydroxyproline O-galactosyltransferase HPGT2 from Arabidopsis with 69.02% of identity |
|---|---|
| Blastx | Hydroxyproline O-galactosyltransferase HPGT2 from Arabidopsis with 69.02% of identity |
| Eggnog | Beta-1,3-galactosyltransferase(ENOG410XV5H) |
| Kegg | Link to kegg annotations (AT4G32120) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019458880.1) |
| Pfam | Domain of unknown function (DUF4094) (PF13334.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |