| Id Trinity | TRINITY_DN48583_c2_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_338438 |
| Sequence | CTTGCCATAAACCCTCTAATGGTTGATGCCCATAGCAACTTGGGAAATCTAATGAAAGCTCAGGGGCTGGTGCAAGAAGTGAGTCCTAAAATTTATATGC ATTTTCTTGTTTAAATTGGTATTCGTATGAGATTAAATTCCACAAACTGCTGCTGTATCAAGTACAGTTTATGTCGAGAGAGGGGAATCTGGCTACCCAG TTTGAGATGATGCTATACTGGATTCTCTAGTATGAGTGATGTTTCATCCTGTTGGGTTAGTCTTTTTATGTAGGAGATTAGTCTCCTTTTAGACCTTTTA GTCCACAGTGATACTTACCCTGGTTTTGGTGCACTACATGCTTTAGAGCCAATGAAGTTTTTGAACACTAATTTGGCTTCCAGTGTGAGATAATTATCTA CTGGCTTCTCCGGAATGAGTTACATGTGTATTCTGCTAGCCATACTCATCTCCTATTCTGTATAGCCTGATAAAAATGGATGTGTTTGGTCTGGAAGCCT GGAGGGCTCCCTTCAATGCTTAGTATTTTAACCCTACTTTTCTTGTTTGCATTTTAGTTACTGATTTAAGAATTCGTGCATGGAACTGTGGTCAAATTCA CAGTTCGATACAGAATTACAGATATCAAGTTGTTGTCTTCAAGCCAGGACTCAGATGATGGCTGGTCTTGTTGTAACATCCATGTCCAAGAGCAAATAGT CAGAATCTAACATTTTTTGCAGGCATACAGCTGTTACCTTGAGGCATTGCGCATCCAACCTTCCTTTGCAATTGCATGGTCCAACCTTGCGGGTCTGTTC ATGGAGTCTGGTGATTTCAACAGAGCTCTTCAGTATTATAAGGAAGCAGTGAAACTGAAACCTTCCTTCCCCGATGCATATCTCAACCTTGGTAATGTGT ACAAGGCTTTAGGGATGCCTCAAGAAGCTATTGTTTGTTATCAACATGCTCTTCAGACAAGGTCAAACTATGGCATGGCTTATGGTAATTTGGCCAGTGT ATATTATGAACAAGGTCAACTGGACATGGCTATTCTACACTATAAGCAAGCTGTTGCATGTGACCCCAGATTTTTGGAAGCTTACAATAATTTGGGTAAT GCATTAAAAGATTTTGGCCGAGTGGATGAAGCAATTCAGTGCTACAATCAATGCCTTTCATTACAGCCTAACCACCCACAAGCATTGACAAATCTTGGGA ATATATACATGGAATGGAACATGGTTTCTGCTGCTGCTTCATATTACAAGGCTACGCTGAGTGTAACTACTGGGTTGTCTGCTCCTTATAACAATCTTGC CATAATCTATAAGCAGCAGGGGAATTATGCTGATGCCATAACATGCTACAATGAGGTCCTCCGCATTGATCCCTTAGCAGCTGATGGGCTTGTAAATAGA GGCAATACATATAAGGAGATCGGTAGAGTTAGTGAAGCCATCCAGGATTATATTCGTGCAATCACTGTCAGGCCTACTATGGCTGAAGCCCATGCAAATT TGGCTTCAGCTTATAAAGATAGTGGACTTGTAGAGGCTGCTGTGAAGAGCTATAGACAGGCATTGATTCTTCGTACAGACTTTCCTGAAGCAACTTGCAA TCTCTTACATACACTCCAGGTTTTGATAATTTTAATTGTCTTTATTTTTCAGCATGAGTTTATTGGAGCTTCTTTTGGTAGAGACCTTTCACATATGCTT TGGGAGTTCATTCTTGGAGCTTCTAATCTATTCTATATCTAAGTTTACCATCCCTATATTTAAATGGCATAGTATTGGTAGGTCTGAGATATAGATTTTG CTGGTCATGTCATGCACTAGGAATGAATTAGAAGTATATTTTGCTGTGTTTTATTCCTAAGCAGACTTTATGCTTTCTCATTCATTATTACCTGCATATT AGTCATTGGCATTTGGCAGTGCCTTTGGTATCATTCTGCCCTTACCCACTGTCTGAAAAGGAAACCAGATGTCTTTACCTGTTGGTATCTGTGATGTGTC TAAATGTGTAGTTTTTCTGTTATCCGGTTTTCACAATGCTTAGCTGTGTTAATTTCAATAATCAAATATGGTTAGTACCATATTTTGAAGTGATGGTTTT AATTTCATCTGGATTGACTAATATTATCTTAATTTATGTTACAGTGTGTCTGCAGTTGGGAGGATCGTGATAAAATGTTCAAGGAAGTGGAAGGGATAAT CAGAAGGCAGATTAATGTCTGGACTTGAGCTATCCATACACCACTTTACTTTTCTTATATTGGATAAATTTATGATATGAGACAAACCTGTTTGTGTGTT GAATGTACTCCGATTGCTATCATTTTCTGTTTTTCAGATGTCAGTTCTTCCTAGTGTTCAGCCTTTCCATGCAATAGCATATCCACTTGACCCATTGCTT GCCCTGGAAATTAGTCGTAAATATGCTGCACACTGCTCCATGGTTGCGTCTCGTTTTTCTCTTCCTCCATTCAGCCATCCTGCTCCTATTCCAATTAAGC AGGATGGAGGGTGTGAGAGACTAAGGGTTGGGTATGTGAGTAGTGACTTTGGTAATCACCCCTTGTCGCATCTCATGGGATCTGTTTTTGGTATGCACAA TCAGAAGAATGTTGAGGTATTCTGCTATGCCTTGAGTCCAAATGATGGTACTGAGTGGAGACAGCGTACTCTGTCTGAAGCAGAACACTTTGTGGATGTT TCTGCCATGTCATCGGATATGATAGCAAAAATGATTAACGGGGATAAGATACATATCCTTGTCAACCTTAATGGTTATACAAAGGTAGCACTCTATCTAG GTGTAATTCCTACTGTAAATCAAAGTTCATAATCAACTTTCGATAGTTTTACTTGGTCATGGTAGAGAATTTCTTTTTTTTGTTTTTCTCTTGTAGCATG AAACCGTAATTGGATAGTGGCCTGTTGGTTTTCATGCTTTAGTTTCTGAAGGTCTCCATGTCTCAGTTATTTGGTTGAATGTGATTCTCCTTGTTTTGTT GCAGGGTGCCAGGAATGAGATATTTGCTATGCAACCTGCACCAGTTCAAGTGTCATATATGGGATTCCCTGGAACAACTGGGGCTACTTACATAGATTAC TTAGTAACTGATGAAGTGAGACATTGGATATTGTCCAGGCTGTACAATTAAGAGAGCTCTTTTATTATTTTATTTTTAATAATTCAACTTGCTTTCTAAT TTTTCTCTTACGATTTTCTTGCAGTTTGTTTCACCACTGCGTTATGCGCATATTTATTCTGAGAAGATTGTCCATCTTCCCCATTGCTACTTTGTAAATG ATTATAAGCAGGTTATTTTTATGAACTTTAATGGAGAACCTTGAGTTCAAGTCAATTGTGTGTGTAAGTTACTATGTTGTTTGTTGTTTATATAAATGCA TGGGTGTTGAATGTTTCTGTCTTGTAAAATTTGTTTGTTCAGAAAAATCAGGATGTGTTGGA BLAST |
| Tissue | pods |
| Gene name | LI_gene_162307; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_338438
| Blastp | Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC from Arabidopsis with 82.91% of identity |
|---|---|
| Blastx | Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC from Arabidopsis with 83.89% of identity |
| Eggnog | protein N-acetylglucosaminyltransferase activity(COG3914) |
| Kegg | Link to kegg annotations (AT3G04240) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019452206.1) |
| Pfam | Tetratricopeptide repeat (PF14559.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |