| Id Trinity | TRINITY_DN48610_c5_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_369447 |
| Sequence | GTAAAATGCAAATTTGGGTAATGAAAGCCATTGTCACAAAAACCATAGTCCTGAATTTGATTAGATCCCTTTCTTTATAATCAATTATATTAATCGATTC AATAATTAATCGATTCACTTCATCAACTATGCACCGTCCTAGACCCTTTTACGCCTCTGAATATCGCCGTGACGCTGGTTTTGCCAGACCCCAACCAGGT CCCAAATCATTTTCTCAGCCACCGCCGCGAAGAGGTGGCGGTGCCGGTGGGGATGTTTTTGTAGAAGCTGGGAGGCTGGCTGCTGAATATTTGGTTTCCC AGGGCATGCTGAATCCTGATGTGTTGTCATTGAGGTGGAACAATGGTTATAATGTTATGGGCGGCGGCGGTGGCGGTGGCGGTGGCGGTTTTAAGAAGCA AGTGGAAATTGCGGTGGAGGGAGGAGGGGGGCGGGGTTCTGTGATTAGTCGGTTGGGGAATGTGAGTGCCCTAGATGGGGGGATGTCTGGGAGGAGGAAA TTGGGTTTTGATGAGTTTGGGCAGAGGGGTAGTGGTAGGAGGAGAGGAGGTTTTCGGAGCAATGGTTTTGATTCGGGTCGCGATTTTCGAAGGAATCAAT CTTGGAATGATAGGTATAGAGGTAATATGGATTTCAATGATAATGATGATAATGATGATAATGATGATGATAGTCTTACTAGGCAGCAAGATGAGGAGGA GCCGGAGCAGGAGCAGGAGCTGCAAGGTGGTGATGGTGTTGATGATGCTTCGCAGAAAATGGAATCAAATGAAATTGTGCCAGGAAGTGAAGGTGGGGAT GATTTGGATGCTGAGGCAGGCAAGGGTGAATGCGTTTCTGCCGAGTTATTGGACTCGAAACAAAATTCTGATGGTGCAGAAAATGATACATGTGATATGG AGAGGGAATTTGGCAAGAGTTCTGACGGTTTGGAGAATCTGAGTGATGGAGTTGAGGTGGTAAAGGAAAAGGATGTATCTGTACATGATAATGATGATAT CGAGAAATCGAGTATCTCGAAAAATTTATCCGTGGAGACCAGTGATCAGGAGAATACTAGCTCTAGCAGGGTTTTCACCGATTTACTTTCACACTGCAAA TCTGTTAAGGTGCCCACCAGGATTCGCTCTTCGCTAACAAACAAGAATTTGAAAGCTGATCATCGTCATCATCAGAATGGTGAAAATGACGTTGTCCGTG ATATAGGGAGTCTTCAAGGACCCGAGGTCTTCGCTGAAAATGAGACTGTTAAAGGGTCTCCCTCAGGTGATTTGCTATCTGAGAAAACTTATGATTTAGA ACATACTGGTTCAGACATTTTTAAGGTAGAAGAACCTGTTCATGATGTTGAGAATGTGAAAGAATTAGATACTGTATGTAATGCTGAGGAAGTTCAACGT ATTGGATCTCAATCTGGTCAAGATGTTGGTTATTTGCATGATAACAGCCATGAGTCTAGTGTTACGCTGCCGGAGTATGGAAGTTGCAGCACCATTGTTG AGGAAAGGGGTGAAAAGCGTGCCGCCGAAGCTGGCGATATAAGGGGGGAAACCAAAAGACTGAGAGAGTGGCTTCCTGTCCTTGTTCCAAGGACTGGTGA GTACTATGTAAATAGCAATCAAATTGGAACAAAAGAGAGCCAGGGAGAAGAAGAGATTTTACCGATTGATAAAGTGACCATGATTTCTGATCAAGGGAGC CTAATGAGTAGCTCTCGGTTCACACAAGGTGGAGATAAACAATTTCTTCAATGTTCAGAGGAGAAGCAATCATTGCCAAGTTCATTTAGAACTTGTGATC TGAATCTCATGGAAGTATCCGAAGTTCATGAAAGTCATGTTGATCATCCAATTCTTATGTACTCCCCTGATACTAAAGCAAAGAAAGATGTACCTGTTGA TATAGGTCTGTCCATGAATCGCGCTAGTGTATCGGGAAAATTCAGTACTCATTCAACAAGTGGTAAAGAAATCGAAATAATTGATCTAGAAATTGATTCC CCTGAAGAAGAAAAGCCAGTTGAAAATGCAGAGAGAAAGACGGATGCTATGTTTCAAGGCCTCGATGGTCTTTCCAGCCATGCTCAAAGTACTGCGGATA TACATGATGTTCAGGATGGATATGGACTAATGATATCAGAGTTGCTTGCAACAGATTTCCCAAACTGTTCGTCAGTACCCAGCGACATAAATTCTGTTCA CAATGAAATGGACATTCATAATGGAACGGGACCACTTACTGCAGAAGATGATTCTATATATATGTCGCTGGGAGAAATGGCACTGGGAGAAATACCACTA AGTTTTTTGCGTTCCTGGGAGCAGCCGCCATCACAGGATTATCAGAAACCCTTCTGATTTCATGTCACTCAAATCCCCTCCAGAGACATTATGTAGTGGT ATGCTTTATACTATCCAACAGGGTCCTCTGTAGAAGTAACTAGCTCTATACTAAAGTGAAATCGTGCTTTGGATTTTAACTTTTTATTAATTGTCTCATA TTTGAAATTGTATGATCTGAATTCTGTCCTTCCTATTGTTCTGTATCGTTTTCTAATGTCTCTGCACAACTTATCTGCATTTAGATAGATTGTTTTTGTC ATTTGAGGAGAATTGTGTCAAAATTGCAAAATATACCTATTAGTAGGGAATGTTTGATAAAATGGCTTTAAATTGACATTATAGTGGAAATCTAGAGCCC ATTGGATTCCTGTGAGATTTAATCGCGAGACCAATTTCAAATTGTCATTTTGACTTTCATGTTATTTAAAAAAGTCGGCAAGCCCTAAGAAACCTCTGAA ACCCATGAGTGAACATGGCAGAGGCCAGTCCAACATGGCTTGAGCCTTAGAGCGATCCAAATGAACACCCTGTGCTACAATGATATGCCCCAAACAAAGA TGTCACAACAGTGGTTTCAAAAACACACTTAGAAAGTTTAGCATAAAATTGGTGATCCAATAATGACTGTTAAATCAGGCGCAAATGGGTAACATGGGCA TCAGAGCATCACCAATAGGACTAAAAGCAAGAATATCATCAAAGAAAACCTATGCAAACGGTCTCAAACAGGGACTTAGTAAGTCATTCATGGCTGACCG TAAAGATGATGGTACATTTGTGAGGTCGAAAGGCATAACCACCAAAAGTTTGGAATGTAGTCTTATACATGTCCTTTGGAATCAATCTAATATGATGGTA ATCGTACCTTAAGTCAATTTTTGTGAAGATAATGGTGCCCCCTAGCTCGTCAAATAACTCATTAATGGTTAGGATAGAGAACTTGTCCTTATTTGTTACA ACACTGAGAGCTCGGTAGTCCACACAAAGGCACCAGGTGCCATCTTTTGAGCACTAATAGGATCAATTAGAAGGGGCTATGGCTGAATTTCTTGAAGCAT TTAAGCAAATAAAGTGGCCACAACCTCCTTCTGTGAGTAGGGTTCTGATATGGTTTTACATTAATATGTGGAGTATTGGGTAAAAGGGTGATATAGTGGG TATGTTTAGTTCATTGCGTCATGGGAGAAGGTATGTGAGTGGAGCCTGTAAAGGAGAAAGGGAAACTATCATGTCAATGTCGATTGAGTGAAAACTATTA CGGACATGAATCCTTAAAGGAGCGATAATATTAAAAGTCGTACATTGAGTAGTTTATCAAGCCTAGTGGGATACGTAAGCCATGAAGGCTCTCCTACCTA GTGGACTAGTACTTTGAGTTGACCTCTCCTCAGATACCGAAACCCTAACATATTCTTTGACTAGAAAACAAGAGAAGTATTATGTTTTTTTTATTGGTAA AATATATATTATGTAGTTAAGGTAGCAAGTTACATATACCATATTAATACAAGTGAACTAACCTACATTTTAAAATAAAAAGTCTCTACATACGTGTATT AGAGCACTCACAGTGGTTGTTCTTAACAGAATAAGAACATTCTTACTTTGTTCTCAATCGTGTC BLAST |
| Tissue | pods |
| Gene name | LI_gene_162566; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_369447
| Blastp | Uncharacterized protein At4g26450 from Arabidopsis with 30.57% of identity |
|---|---|
| Blastx | Uncharacterized protein At4g26450 from Arabidopsis with 30.54% of identity |
| Eggnog | WPP domain-interacting protein(ENOG410YHC5) |
| Kegg | Link to kegg annotations (AT4G26450) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419541.1) |
| Pfam | - |
| Rfam | - |
| GO | - |