| Id Trinity | TRINITY_DN48610_c5_g3_i2 |
|---|---|
| Name Transcript | Ll_transcript_369456 |
| Sequence | CGGACTTTGATGAACCTGAAAAAAAGTGGGCCCACAAAAGCCCAATAGAAGTAAAAAAAACGTGATATTGTAAATCGGTTAAGGTGACGTGTGGCATCGT GTTTGTGAGTGGTGAATATAAAAAGAGAAGCTTCTCCCATTATCTGATTCATTCTGTTATTGTTTGAAACCCTAATCTCGAAAATCAAACGGCGGTGAGA GAGAATGGGTTCTGAGAGATTAACCGGGAAGGTGAAATGGTTCAATGACACGAAGGGATTCGGATTCATCACCCCTGATGATGGTGGTGAAGAACTCTTC GTTCATCAATCTCAGTTAAAATCTGATGGCTTTCGATCCCTCGCTGAAGGTGAATCAGTTGAATTCCAAATCGAAGCTGATTCCGATGGCCGATCCAAGG CTGTTGATGTCACCGGTCCTGATGGCGCTAATGTCCAGGGTAGCCGACGCGGAGGTGGCGGTGGAGGAGGCTACGGTGCTGGAGGTGGTGGTGGTTATGG CGGTGGTAGAGGTGGGGGAGGTTATGGCGGTCGTGGTGGTGGTCGTGGTGGAAGAGGAGGTGGTGGATATGGTGATGGAGGATATGGTGGCGGTGGCGGT GGCGGTGGCGGTGGAGGTTGTTACAGCTGTGGTGAGTCTGGTCACATTGCTAGGGAGTGTCCGCAAGGAGGAGGCGGTGGTGGAGGAAGGTACGGAGGTG GCGGTGGCGGTGGCGGTGGAAGGTATGGAGGTGGCGGCGGCGGTGGAGGTGGCGGCGGTGGCTGCTACAACTGTGGGGAATCTGGCCATTTTGCCAGAGA TTGCACAACTTCCGGTGGTCGTTGAAGTGCAAGAGAATGTCAATTAAAAAGAAGAGAATGTCAATTGAAAAGAAGAGAATGTCAATTGAATCCTACCTAT ATCTTCGTCCTATTATTCATTTCATTCTATCATTCATCTTCCTCTTCCCATTTTACTTGCATAACCCCAGTTACATCAGTTTGAAAAAAAAACGCATACG TGAGTATAGCCAGGTTCTTCGGATGTAAACATCTTAATAAGGATCTTTCGTATCTAAACTTGAGCCTCTTGATCAGATGTTTGAATTGGCGTGTCTGTTA CATAAAATATGACGAAATAATCTCTGAGâBLAST |
| Tissue | pods |
| Gene name | LI_gene_162568; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_369456
| Blastp | Cold shock domain-containing protein 4 from Arabidopsis with 60.59% of identity |
|---|---|
| Blastx | Glycine-rich protein 2 from Nicotiana with 74.67% of identity |
| Eggnog | Cold shock protein(COG1278) |
| Kegg | Link to kegg annotations (AT2G21060) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019414048.1) |
| Pfam | 'Cold-shock' DNA-binding domain (PF00313.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |