Ll_transcript_368291

• Id Trinity: TRINITY_DN48699_c3_g3_i2
• Name Transcript: Ll_transcript_368291
• Sequence: AAAAAAGAAAAAAAGATCCCAATAAAATTAGAAAAGCGGTAAACTGAAAATTTCAATCATGAATACCCTCCCTCGCTGACCCCAAATTTTATTTGTATTA TGCCCCCAAACCCCTTTTCTTTGTTTCTCTCTCTATCAATGTCTCTTTCTCGCTCTAAAATCTCAAATTCCAAAGTAACATCGAAACGCCATGACTCTTG TAACCTCTACGGAACCAACTGATTCGTTTCATAGGTTTTCTCCCACATTGGGAATTCCTTGTTGACTTCTTTTGCACTATTAGGTTTCTTTTTCTCGATT TGGATTGAATAGGCGTTTTATGCGTTTGGTGTTGCTTTCACTTTACTCTTTAGCATTTGAGTACTTAGGGTTTTGTTTGAAATGAGAGAGGGTTTGAGAT CTCGTACTCGGTTGGGGAATGATTCCGTTGATAGAGGAGTTGTTGAAAGGGGCAGAGTGGAAAAGAACAGTTGTGATTCCAATGTTGAGGGTTCTTCTTC GCTGCCGCAACAAGAGGAGGGGTTGAACTTAACGAATGATAAGATGGACGAGGTTGAATGTGTGGTTAGAAAAGAATGTCGTTTTGATTTGAACGAAAGT CCGAGTGGGAATGCTGATTTAGCTAATGATGTGATTGATAGGGCTTGTAGTAGTGGTAGTGGCGGGGGCAGTGTTGGAGAAGCTGATGCTGAGTCAGAGG TGAGTAAAAAAGAAGTGAGTGATAAGGGTTGTTGTAGTGGCGGGGGTAGCGGCGATAAAGAAGCTGTTGAGACATATAAGAATAAAAAAGGAGTTTCAAA TGATAGCGTGTTGGTTGGTGGTCGAGTATTGCGCTCTAGATCAAAGAGGGGAGATGAGACAAAATCCTGTAATGGAGAGAACAGCAGTGCCCTTCCCGGG AAAAGTAAGAAAAGTGGTGGGCTTGAGAGGATAGAAGTTAAGAACGAATATGATGAAGCTGATGAAGTTGTTAGTGACTGTCATGAGAATGAAAAAGTTA GGCTGAAACAGAAAGGGGGCGAGAGTAATTTGAAAAGGAAGCGTGGTAGGCCTCCCAAAATAGAGGCGAGAGAGGAAGATCAATTTGTTGTTCAGTTGCC ACGTAAGCGTGGGAGACCTCCCAATATAAAGTCCAATGAGCAAGGCCAAGCAGGTGATCAATTAATACGTAAGCGTGGAAGACCTTCCAAGGTTGGCCTA CAAAACCAGCTCCCAGAAATGGCACATAATAGAAAAGGAAAGGTGGGCTATCAAAATGGTAAAAAAGGTTTTCCTGCAGTCAAGAATAATAAATTTGTGA AGGTTTTGAAAACTGAAAACAATGGAGTAGCCTCACCAGTGACATCAAATACAGTGAAACCACCTGTTGGTGATAAAAGTGTACGTAGCAAGCATAGAAA GCTGGTGAGGGAACAAATAATGGAGCGTCTCTCATCTGCAGGCTGGACAGTTGATTATCGACAAAGGAATGGAAGAGAGTACCATGATGCAGTGTATGTT AGTCTTGATGGAAAGACACACTGGTCAATCACCCTGGCTTACAATAGACTTAAAAACCATTATGAAGCTGGTGATGGTGAAGGTAAGGTATATGGACCAG GTTTCAAATTTACTCCAATACCAGAAGAGGATTACAAAATACTAACTAAGGTAATCAGCAAACAAAGAATTGATAAAAATAAACCAAGGCCAAAGGGGGG AAAGCACAGAAAGACAGTTGATGGAGTCAATAGAAAAGTGAAAAAAGAAAAACTGGGTTCTGGTGCAGGCAAGGGGAAAATTAAAAGGAAACGGACACCT CAGGAAGCGGACAATGCGACACCAAGCAGAATGTCAGTCATGGTCAGGGATCATAAGCGACACAAAATGCAAAACAAGAAGCGATGTGCTCCATTGGTTC GCAATGCAGAGGAGGAGATAGATTCAGAAACTGATGGCTATGTACCGTACAATGGAAAGCGAACTGTGCTTGCCTGGATGATTGATTTGGGAACAATTGT GCAAAACCAGAAGGTTCATTATATGCATAATAGAAAGGAGTTTGCGCCAATGGAGGGTAGGATAACAGGAGATGGCATTCATTGTGGTTGCTGTAATGAA ATAGTAACAATTTCAGACTTTGAAGCTCATGCAGGAAGCAAACTCTCTGAACCACTTAAAAATATATATACAGAGGGAGGAACTTCTCTCTTACAATGCC TGCTAGATTCATGGTTTAAACAAGATGAGTTTGAACGTAAAGGTTTTCATTTTGTTGATACCGTGGGTGAAGATCCAAATGATGATACATGTGGTGTCTG TGGAGATGGTGGAGACCTGATCTGTTGTGATGGTTGCCCATCGACATTCCACCAAAGCTGCTTGGATATAAAAAAGTTCCCATCTGGTGACTGGCACTGC ATTTATTGTTGTTGCAAATTTTGTGGGTTGGCTGAAGAAAGTTCAAACCAAAGTGACAGCAATAATGATTTTACTGTGTCTACATTACTGACATGCCATT CATGCCAGGAAAAATATCATAGATCTTGTCTTGAAGCAAATGGTGCCAATACTGATGATTCCATAGATCCCATTTTTTGTGGAAACAAATGTGATCAGTT ATCTGAGAATCTTAAAATGCTTCTTGGGGTTAAACATGAAATTGAAGATGGATTTTCTTGGTCTTTTATTCGACGGTCAGATGTTGGTTTTGACGCTTCT GAGATAAAACATGAGATTGTTGAATGTAATTCCAAGCTGGCTGTTACATTAACAATTATGGATGAGTGCTTCATGCCATATATTGATCATAGAAGTGGGA CAAACTTGATCCACAGTATTCTATACAATTGTGGATCAAACTTCAAAAGACTGAACTATAGTGGATTTGTCACTGCAATTCTAGAGAGAGGTGACGAAGT AATTTCTGCAGCTACTATAAGGATCCATGGGAACAAAGTAGCAGAGATGCCATTTATTGGGACCCGTTACATGTACAGGCGACAAGGAATGTGCCGCCGA CTTCTAAAAGCCATTGAATGTGTAAGTTCAGGATTGGTATAGTTGTCTCTTCATTTCTAGTTGGATAAACTTTGACAATCATATTCACAGAACTATTTTC AAAGTTTTAGGTTTTGTTCTTTGAAATTATGTACAGAACTATTCTAGAAGTTTTAGGTTTCTGTTCTTTGAAATTATGTATTGTTTGCCTTTTATTTCTC CCCCTGGGTATTGTTGGTTCTGTCTCATTTTGCAAAAGTAAATGATTTCTGATCTGTGCCATAGTACCTTAAAAGGTGGGATACCATTTTAGTAGCCAGT TGCACAAACATTGGACATTTAACATGAAGCTTCATACCTTGAGTTTAGTCTAACAAGGGAACTGATATTGATATTTTCGCTTTTGTTTCTAGGAAGTGAG GAAAATGAAAGTAGATTTTAGTAAGTGCATTATTCATTTTCATGTTCATACAGATATATGCTTTTGATAGCACTGAATCATAAAAATAAAGGACTATTAT TTATTCAACAAAATCTACTTTCATCTTCTCATATTATTTGACAGTCAATAATTTAGCTAAGGGCCCAGATTAGATGATTAATCTTATAATCCGACAGAAT CATTTTGCACCTTGATGCATTATATGTTGGTAATTTTTAGTTTTTCTCCTGTAGAGTGATCTTTTTGTTCTTCATTTTTTATTCATTTTATCTGGTAGTC TTTGACCATTTTGTTTTGCTAACTTCAAAACTTATGTTTCTTCAACTATTATTACCAGGCACTCAGCTCTTTAAATGTTGA
• Tissue: pods
• Gene name: LI_gene_163349;
• Additional information: details;

Expression of Ll_transcript_368291

FPKM

• PAB: 0
• PNAB: 0.3
• PS1: 0.1
• PS2: 0
• PS3: 0.2
• PW1: 0.1
• PW2: 0
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_368291

• Blastp: Increased DNA methylation 1 from Arabidopsis with 36.79% of identity
• Blastx: Increased DNA methylation 1 from Arabidopsis with 36.16% of identity
• Eggnog: PHD(ENOG410Y0W7)
• Kegg: Link to kegg annotations (AT3G14980)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019428395.1)
• Pfam: AT hook motif (PF02178.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;