Ll_transcript_421643

Id TrinityTRINITY_DN48745_c4_g1_i3
Name TranscriptLl_transcript_421643
SequenceCTGTACCAAATTTTATTCGGTTCGACCCAGCCAAGTCACACATGTGGAATGGTAATTAGATATGATGATCCTTCAATTAGATTCCTTCTAAATTTCTAAT ATCACAAAAGGGCACAATCGTAAATATATTAGTTTCATGCATCTTCTTCATCCCAATTGTGCTTAGTTGCTGCAAAACTCTTAAACCCTAACCAAGCCAC TTCAACCACATCACTTGTGATTCTCACCAGTTTCAATTTCTGAACATAAAACAAAACCGTTTCTGCCAACTCATCAATTCGAAGATTTGTTTCTTCACCT CGTTTTCTTCCAATTTCGATCATTTGTGTTAAATGGCCAATAATTCTCAGCCCCCTGGTATGCAGTTTCGGCCAGTCATTCAATCTCAGCAAGGACAACC ATTTGTTCCAATGACTTCACAACAATTTGGACATGCAGGACATGCTATACCGTCCTCAAATGTTGTTCAGAGTCAGCAAGTGCAGTATTCTCAACCAGTG CAACAGTTGACTCCAAGACCAATTCAGCCTGGTCATCCTGCACCCCAGGCTCCTATGCCATATATTCAGACAAGTAGGCCACTGACATCTGCTCTACCAC ATTCACAGCAAATGGTTTCCCATTTAAGCAATCATATGCCTGGCTTGGCTGTGTCAGGAGCACCTCCACATCCTTCATATACTTTTGCACCATCTTATGG TCAACAGCAAGACAATGCTAATGCATTGGCTCAATACCAGCCTCCTCCTCAAATGCTTGCACCTCCTGCTGGACAACCTTGGTTGTCCTCTGTATCTCAG AGTGCTTCTGCTGTTACACCAGTGCAGCAGGGTGGAGTACAGTCATCTGATTCTACATCAACTGATGCAAGAACAAGTACCCCTAACCAGCAGTCCTTAT CTGATTGGCAAGAGCATACTTCTGCTGATGGAAGAAGATATTACTACAACAAGAGGACAAGGCAATCTAGTTGGGAGAAACCTTTGGAGTTGATGTCACC TATTGAGGTGAGTTGTTTTGATGACGTGTTGTTGTTGTTGCTGCAATTTGATGTCATTTGCATTATCTACAGGACATGCCTTGAAAATGTTATGTGGTCT AGTATGGTTGTTGACCATTTTTGCAATGTATTCAAATATCAAAAGGGTTTATGTTGTGGATATCCTTTTATGTGCATGTGCTTCCACTGATTTGTAGATA TCATGGCAAGTCAGGAGACATTTTAACAACTGCTCTATATGGTCACTGTGAAGCGGTGGTTGTACTTTCTCAAGGCAGGCAACAGTTTGCTATTTACATT ATTTTATTTATCTTAAAAATGTGACATTTGGTGCATAAATGTGGTTCTGCAGTACCGTTAATGATGGTTGATTGCAGCCTACCCATCAACTTCCTCCAGC GGTTTTGTAGGGTTATTCTTTATGGGGTGTGCATGTGTTTGTGTAGTATTGATTGTTTCCTTTGTCAGTTTCTTTGCTCTCGCTACACCACACAAGCATA AATTGTGTGCCTTTATGCTCTATGTCATCTTCCTTTTTTTGCCGCTTTCTCCATCTCTGATTTTGTCTCCTCACATTTTTATGATCTTGTTTCAGTGCTC TATGTCATGCACAAGTTCTTGTTTATTAAGTTATTTATTTAATTTGTATTAGTATTGGCTACATTATCATATAACAATAGCTAACTCTCGAGACATGTAA TTTTTTTGTTATTTGTTTTTAATAGACACCTCTTGTTTTTGGCAGCAGGATGCGTTAATTAGTATTGTTTATATGATGACCGTTCTTGAATGTTTACTTT TAGCATTTTCAAATCCTTGCTAATTCTTCTGGATGTGACAGCGGGCAGATGCATCAACGGTGTGGAAAGAATTCACTTCTTCAGATGGGAAAAAGTATTA TTACAACAAGATTACTCAGCAATCAACATGGTCAATACCAGAGGATCTTAAGTTGGCTCGTGAACAGGCACAGAAAGCTGTGAACCAGGGAGTCCAGTCA GAAACAACTGATGCATCCAATGCTGTTGTCTCCTCTAATGCAACATCAACAGATGCTAATGTAGCTATTTCCAACACTTCTTTGACATCAAATGGGATTG CTTCAAGCCCTGCTTCTCTCCCACCTATCGGAGCCGCTGATCCGCAACATTTGATTTCTGGATCAGGGACCCCTGTTTCCCACTCTATCGTTACTCCTGG ATCCACTGGAGTTGAACAAAGTACCATGACAATCACTGAATCTATAACAGTTGCAGGAAGCTCAGGAGCAGCTACCGATTCACTCGATTCCAAAGTGCCA TCCATTGTTGAAAATCAAGCATCTCAAAATTTTGCTACTTCCATCACTGGAGCTTCTCTTCAAGATATTGAGGAATCCAAAAGAGGAGTGACAGGGGTTG GAAAAGTTAATGTGACTCCACCTGAGGAGAAGGCCAATGATGATGAAACTTTGGTCTATGCGAATAAGCTGGAAGCAAAAACTGCATTTAAAGGGCTTTT GGAATCTGCGAATGTTCATTCTGATTGGACATGGGAACAGGCAATGAGAGAAATCATCAATGACAAAAGATATAATGCGCTAAAAACACCTGGTGAACGA AAACAAGCTTTTAATGAGTACTTGGGCCAAAGGAAGAAGATAGAGGCTGAAGAGAGGCGCATGAAGCAGAAAAGAGCTCGAGAAGAATTCACTAAGATGT TGGAAGAATGCAAAGAACTTACATCATCCATAAGGTGGAGCAAAGCTATAAGTATGTTTGAAAATGATGAGCGATTCAACGCTGTTGACAAACAAAGAGA CCGGGAAGATTTATTTGAAAGCTACATGGTGGAACTTGAGAGAAAGGAAAAGGAAATTGCTGCAGAGGAACACAGGCAGAATATAGCGGAATACAGGAAA TTCTTAGAGTCCTGTGATTATGTGAAGGTGTATAGTCAGTGGCGGAAAGTCCAAGATCGGTTAGAGGATGATGATAGATACTTGAGACTTGAAAAAATTG ATCGCTTGCTTGTTTTCCAGGACTATGTACGTGACTTGGAGAAGGAAGAAGAGGAGAAAAAAAGAATACAGAAGGACCGAGTCTATCGGGGCGAAAGGAA AAACCGTGATGCATTTTGCAAGTTGCTGGAAGAACATGTTGCTGCTGGAATTCTTACTGCTAAAACTCAATGGAGAGACTATTGTTTGAAGGTCAGGGAT TTGCCTCAATACCAAGCTGTTGCGTCAAATACATCTGGTTCCACTCCAAAAGAAATATTTGAGGACGTTGCTGTAGAACTTGAAAACCAGTATCACGAAG ACAAGACACTCGTAAAAGATATAATCAAGACGAGCAAGGTTACTGTAGTGTCTACATCAGTGTTTGAGGACTTTAAGTCTGCTGTCTCGGAAGAAGGTTG CAAAACAATATCTGACATCAATTTGAAGCTTGTATACGAAGAATTGCTAGAGAGAGCTAAGGAGAAGGAGGAGAAAGAAGCTAAGAAACGCCAACGCCTT GCTGATGATTTCACTAGCTTGTTATATACATTTAAGGATATTACTACTTCTTCACAATGGGAGGATTGCAAGCCACTCTTTGAAGAGACACAAGAGTACA GGTCCATTGGGGATGAAAGCTACAGTAGAGAAATTTTTGAACAGTACATTACGTACTTGGAGGAAAAAGCTAAAGAGAAGGAACGCAAGCGTGAAGATGA AAAGGCTAAAAAGGAGAAAGAAAAAGAAGAGAAAGAAAAACGGAAGGAGAAGGATAGAGAACGTGAGAAAGAAAAGTCTAAGGAAAGACATAAGAAGGTT GACACAGATAGTGAAAATCAGGAAATAAATGACAGCCATGATTACAAGGAGGAGAAGAAAAAAGAAAAGGATAAGGAAAGGAAACATCGGAAGAGGCGCC AGAGCAGCATAGAGGATGTTGATTCTGAAAGGGATGAAAAGGAAGAGTCCAAGAAATCACGAAGACATGGCAGTGACCGCAAGAAGTCTAGGAAGCATGC GAACTCTGAATCAGATAACGAAAGTAGGCATAGAAGACACAAGAAGGAGCACCGGGATGGTTCCAGAAAAACTGGGGGCCATGTGGAGCTTGAAGACGGG GAGCTCGGTGATGATGGTGATATTTAATTGTTCGTTGTAGTGGTGAGATAAAGAACTTAAACTGCATCTTTTGAAGAATATTATTGAGTTCAATTGTCAT TGTCAAATACACTTTAGGTCTTGTTATTCCTCTTTTCAGGAAACATCTGACTTAGGATCTTGAAGTGCAAAACGAGTTTTAGAGTACTAATTTTAATTTT ACACCAGCCACTTTTGTTTAGATGTTCATCTTTTGCTGATTATATAGCAGATAAATTTGGAATCCTATGGATAGACTTACTTCTTTTAATAACGTTATTA TTAGTAGAACATTGTATTTTATATGAATTCAGCATCTGAAGTCATTTCATTCTTCCTCGTCTTTCCTGATGCTGACATGGAAAAACCG BLAST
Tissuepods
Gene nameLI_gene_163653; 
Additional informationdetails; 

Expression of Ll_transcript_421643

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_421643

BlastpPre-mRNA-processing protein 40A from Arabidopsis with 60.13% of identity
BlastxPre-mRNA-processing protein 40A from Arabidopsis with 59.25% of identity
EggnogPRP40 pre-mRNA processing factor 40 homolog(COG5104)
KeggLink to kegg annotations (AT1G44910)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019436968.1)
PfamFF domain (PF01846.18)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;