Ll_transcript_419500

• Id Trinity: TRINITY_DN48752_c2_g1_i7
• Name Transcript: Ll_transcript_419500
• Sequence: CATAATTTCATACCAATCATTTAATATTTCCACTATTTATATCTTATAAGATATGGTTTCATTTTATTTTCAGCACAACTATGTTATAATTTTATTACAT AGGAGACATAGGATATATATATATATATAAGTGTGATGTGAAGTTTGAAATCAGTTTTCCATGTACTAAACTTCCATTGATTTGGATAAAAAATGGCAGT GCAAAACTCTCTACAAATTACTAGTAGTGGTTCTAGATCTTATGAGGATGATGGTCGTGCTAAAAGGACTGGTAAAATTCTCTAGGACAATCCATAACCA TTCCATTTTTCATACACATGCAATTAGAGTCATGAAGATGAGTCCTTCCATTAATTGTTATTCTATCAGGAACATTAACAAGTGCTGTGGCTCATATCAT TACTGCTGTTATTGGTGCTGGTGTTCTATCTCTAGCATGGAGTACTTCACAATTAGGATGGATAGCAGGACCACTTTCCTTGATGTTTTGTGCAATTGTT ACCTATGTTTCTTCATACCTCCTTTCAGATTGTTACCGAACTCCGGATCCTGTATCCGGCAAACGGAACTACTCTTACACTGATGCTGTTAGAATCTACC TTGGCAATAAAAGAACATGGTTGGCTGCTTTCCTACAATATTTGACCTTGTATGGTACTACTACAGCTTATGTAATTACCACAGCAACTTGTTTGAGAGC CATTCTAAAATCAAATTGTTTTCACAAGGAAGGGCATCAAGCTCCATGCAAATACGGCGATACGGTGTATATGATGATGTTTGGACTAGTTCAGGTTATC ATGTCATTCATACCAGATCTACATAACATGGCATGGGTTTCAGTTGTTGCAGCCACAATGTCCTTAACATACTCCTTTATTGGACTAGGACTAGGCCTAG CAACAGTAATAGAAAATGGAAGAATTATGGGGAGTGTAACAGGAGTACCGGCTGCAAATATAGCTGACAAATTATGGTTAGTCTTCCAAGCGCTTGGTGA TATTGCCTTCGCCTATCCTTACTCGGTCATCCTCCTCGAAATACAGGACACTTTAAAGTCACCTCCACCTGAAAACAAGACCATGAAAAAGGCCTCCATG ATTGCTATCTTCGTTACAACATTCTTCTACCTCTGCTGTGGATGCTTTGGATATGCTGCTTTTGGAAATCAAACACCAGGAAACCTTTTGACAGGGTTTG GGTTTTACGAACCGTACTGGCTCATTGACTTTGCTAATGCTTGCATTGTTCTTCATTTGGTGGGAGGATATCAGATTTTCAGCCAACCAATATATAGTGC TGCTGACAGATGGTGTTCAAGAAAATACCCTAACACTGGCTTTGTGAATAATCACTACAAGTTGAAACTGCCTTTGTTGCCAGCTTTTCCTCTAAATCCT TTCAGGATATGTTTTCGAACAGCCTATGTAATTTCGACGACCGGACTTGCAATCCTGTTTCCATACTTCAATCAAGTTCTAGGAGTGTTAGGAGCTATAA GCTTTTGGCCATTGGCTATATATTTCCCTGTAGAGATGTACTTTGTGCAGAAGAAAATTGGAGCTTGGTCTACAAAATGGGTTGTTCTTAGGATATTCAG TTTTGTTTGCTTTCTTGTGTCAGTCATGGGCCTTGTTGGATCCATTGAAGGAATCATAAGCCAGAAATTAAGCTGAAAGGTTTATGCAAGTCCTCTTATT GGTACTTAATTTGTTTAGTTGCTTTATCTTTCATGTAATTCAGATCACAATAGTTCTATAATTGTTGTTCAAAGTGAATAGGGTGTTGGACATGGGATAC TAGTAGCTTTGCTTAGAGATGAATTTCCTTTTTACATATACAAAATCTTAAACTTTCTATTTGGTTAATAGAAAGGTACATGGCAAACACAATATTGTTG ATATTAAATTTCTTTGTACAATGCACATGTGGCCTTTAGTAGTTGTTGTTACCTTAGCTTCCGACAATTCTAAATGACACGAAATAA
• Tissue: pods
• Gene name: LI_gene_163720;
• Additional information: details;

Expression of Ll_transcript_419500

FPKM

• PAB: 3.7
• PNAB: 0.5
• PS1: 0.2
• PS2: 0.3
• PS3: 0
• PW1: 0
• PW2: 0
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_419500

• Blastp: Probable amino acid permease 7 from Arabidopsis with 60.71% of identity
• Blastx: Probable amino acid permease 7 from Arabidopsis with 61.28% of identity
• Eggnog: amino acid transport(COG0814)
• Kegg: Link to kegg annotations (AT5G23810)
• CantataDB: Link to cantataDB annotations (CNT0002804)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019435717.1)
• Pfam: Transmembrane amino acid transporter protein (PF01490.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;