Ll_transcript_420866

• Id Trinity: TRINITY_DN48773_c1_g2_i5
• Name Transcript: Ll_transcript_420866
• Sequence: CTTTTAAATGTTATAATCTTGAAAAAAGAGAAGCTATAAGCTGCTTTCAAATTTTTTTTTTATCTAATGGCTTTAAGTTAAAAAGCTACATGCTAGCTTG GGAAAATTGCTATAAGAAACTCAACTAAAAACCATCAAAGAACCTTCTCTTACTTCATCAACTTACCCTTTCTTCCACTGTTAAATTCAGATTCTTCAAT CTCTCTCTATCTTGTCCTTCTCTTTCTTTCTTTTTCATTCCATTTTTGAGAACAATAAGTGAGTACAACAGCACTAGTCTTAGGTAGTAAAGTTTGATGT CTGTGCCATTAGAGCAAAACTATGCAGCCTTATCACCAGAGATTCTAACAATGGAAAAAGCCTCTGAACCATTTTCTCATAAAACTAAAACCACAACATG TAGCAGTGGCTTGAACCTTAAGGCAACTGAACTGAGACTAGGCTTGCCTGGTTCTGAGTCACCAGAGAGAGATGAGAATAATGTTGCTGTCTACCCTTTA TCCATGCACAACAAGTGTTTTGTGTCTGGTGCCAAAAGGGGTTTCTCAGATGCCATTGGTGGTGGTTCTGGCAAGTGGATTCTATCTGGAAATGGTGATT CTGAGGTGGGTTTGGGTAAAGATGGTAACTTGTTCTCTCCTAAGGGTGTTATTGTTGCTAAGGCTCTTGTTGGAGCTGAGTGTACTAATCAAGATAAAGT TCCTCACTCATCAATGACATTGAATGAGAAGAAGCATCAGATATCTGCTACTGCTGCAAAGGAACAAGTTGTAGGATGGCCTCCAATCCGTTCTTTCAGG AAGAACTCAATGGCTATTCAGCCTCGAAAAAATAATGATGATGATGATGATGATGCCGAAACCAAGTCTGGTTGCCTTTATGTAAAAGTCAGCATGGATG GTGCTCCTTATTTGAGGAAAGTGGATCTCAAAAACTTTGCCACTTACAGAGAACTATCTTCAGCACTGGAAAAGATGTTTACTTGTTTTACAATCAGTGA GTTCTTTTTCTACTTGCAAAATTGCAATAAGTGATTCTGGTTAGACAAATATAGAGAACTTATCCTGATCAAATCAAGCACCCTTTTAAATCTATGTGAT CATTAAATCATGATCCTAAGTCTTTGACTATCACAGCCTCGGGTCAGTTGGTTCTATCAGCTGAGAAAACTTGTAGGAGTGCTATGAATAAGTCTATTAG TAGTGTTACAGAGACGGCGATAAGCGATCTCTCCCGAAAGTTTAAGCCTACATGATGCACACAAGCCCATCTTTACCATGTAATGAAATTCGGGTGCAAG TATATGAGTAACTTTATAATAGATTCTGATGTTTATATGGCAAGTGCAGGCCAATGTGGCTCTCATAAGTTGTGTGAAAGCAGATTGATGGACCTCCTCC ATGGTTCCGAATACGTGCTCACCTATGAAGACAAGGATGGTGATTGGATGCTAGTTGGAGATGTTCCATGGGGGATGTTCACTAACTCTTGCAAGAGATT GAGGATAATGAAAAGTTCTGAAGCAATTGGACTAGGTATTGAGTTTTATCAATCTGATATATGTGATGGTTGATGAGTTTTCTCAATTCAAGAGCAATAT ATAAAAGAAAGCATAGATTATAATAATCAAAAGAAATTGCTCATAGCCTATTCTAAGATGAAATAGACAATGGAGTTCTATTTAGTGTAATAATCATACT GCAAGAAACTTTTGAAGCTATAGATCTTCAATTCCATAAATACTCATGTAATTATGTAGTGCTATATAAACAATACTTTACACATAAAACTTGGGCATTG TTGTTTATGTATTTGTGGTACCATTCTCTAATAAAAACACCTTACATGTGTAACAAGTTGTTACACGTGTTATATTTTTATTGATGAACTGTTACGTATG TTTTTACCGGAGAACAGCACCACAGGTACCTAAAGATCGATAACAAAGTTTTGTCGTTAATACTATCGGTAGTCATGGCCTCATGGAAGAAGTTGACATA GTTAGCATATTTTGTGCTAAAATCTAAGCCTCCATCTGATTCCTGCAGCACCTAGAGCCATGGAAAAGAGCAAAAGTTGCAACTAGCACAATGCTGCTGA TACAGAAAGATTCAAACTCACATTAAAGCACATCATATCATATGATATCAAAAGCAGGGTAGAGTTGTGGCATCTCTTCCTTGCTTGTGTATAATTCTAC ATATGAAATTTTCTTAAGGTTTTCTTAGGTTTGTTTCCCCACCATTTCTCTTGACCACTGTTTTTGTGGACTTCATAGGGCTAAAGCTAAGTTTGAAGGT AAGTTTTGTATTTCTTTAGTAACTTATATGCTTTGTCTCAAAAGGTTCATGTAAGTAAGCATTTTCATTCAAGGAACAGAAAATAAGACCATACTTTGTT GTGTTCTATGAAGAAATTTTATGGTTTTCCTCACTTTTGGAGCATATCATATGAGCTCTTGTACAACAAATTTCCACAACTTGTC
• Tissue: pods
• Gene name: LI_gene_163882;
• Additional information: details;

Expression of Ll_transcript_420866

FPKM

• PAB: 0.3
• PNAB: 0.3
• PS1: 0.1
• PS2: 0.1
• PS3: 0.1
• PW1: 0
• PW2: 0.2
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_420866

• Blastp: Auxin-responsive protein IAA27 from Arabidopsis with 51.64% of identity
• Blastx: Auxin-responsive protein IAA27 from Arabidopsis with 51.64% of identity
• Eggnog: auxin-responsive protein(ENOG410YEX5)
• Kegg: Link to kegg annotations (AT4G29080)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448380.1)
• Pfam: AUX/IAA family (PF02309.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;