| Id Trinity | TRINITY_DN48773_c1_g3_i5 |
|---|---|
| Name Transcript | Ll_transcript_420872 |
| Sequence | TTTGAAGGTAACAAACCTCCCTTCTGAATTTTTCATTACTAATAATTTACTGATAGAAATAGAAAGGTAGAAGGTGAGGTTAAAGTGAGAGTGATATGTG ACTATGTTACATTCAGAGTTTATATAGAAACAGAAGTAACTCAAAACCTCACAGAACCTTCTCTTCACTTCATCAACTTACATGTGAGAATAACAAGTAA TAGTGTAACAGTACTAGTGTTAGGTATTGAACTTGATGTCTCTGCCATTATCATCAGACCTTCCAACAATGGAAAAAACCTCTGAAAACTTTTCTCATAC AACTAAAGCCACTGGGAGCAGTGGCTTAAACCTTAAGGCTACTGAACTAAGATTAGGCTTGCCAGGTTCTGAGTCACCAGACAGAAATGAGAATAATGTT GTGTACCCTTTAAGCATGCACAACAAGTGTTTGGTTTCTGGTGCCAAAAGGGGTTTCTCAGATGCTATTGATGCTGGTTCTGGCAAGTGGGTTCTCTCTG GGAATGGTGGATCTGAGATGGGTTTGGGTAAAGATGGGAACTTGTTCTCTCCTAGGGGTGTTACTGCTGTTAAGGCTCTTGTTGGAGCTGAGTGTGCTAA CCAACAAAAAGTATCTGCTGTTAAAGATAAAGTTCACTCTTCAAAATCATTGAATGAGAAGAAGCCTCAGATATCTGCTACTCCTGCTAAGTAGCATCTT CTTCCTTTATCCTTATTCTTCTTGTTTGTAGTGTTAAATTTTGTTGTTGCTATATTATGTTTTTCTTGTAAAATATTTGTCTAATTTTGTTGTTGATGTT GGTTCATTTTTTGGTTGTTGTCCGATTCTGGTTTATAGTTTTCTTATTTATGTGTGTGCATGTTAACAAATTGATGGAAATTAAAATAAATTATACTGTT GATTTTTTTGTTGCTGACTTGCTGGATTATGTTTCCCCGGACAATTATTTGTCCAGTTTTGTTGTTGATGTTGGTCCTTAAGTTCTGTGATTTTTTTTTG TTGCCATGTCTCTCAGTTTATACTTTTCTCATTTCTGTGTGCATGCTAACAAATTCATGGAAGCAATAAGTAAAGGATGTTGATGAGCAATTCGGGATGG GATGCTCCAAAGAAAGATGAAAAGGATTATTTTCCCTGAAAAAAGTTTTACTTGGTTAAAATTTATTTTTAAAGGGTGAAGAGATTCTTTCCAGGTGAAA CTTTGAGATGTCAAAGCCTGTAACTATTCTTATTGCTGATTATCTTTTCAGGGAACAGGTTGTAGGATGGCCACCAATCCGTTCTTTCAGGAAGAATTCA ATGGCTACTCATCCTCAAAAGAATGATGATGATGATACAGAATCCAAGTCTGGTTGCCTTTATGTAAAAATCAGCATGGATGGTGCTCCTTACTTGAGGA AAGTGGATCTCAAAATCTTTAGCACATACAGGGAACTATCTTCAGCACTGGAAAAGATGTTTAGTTGTTTTACAATCAGTGAGTTTTTTTGTACTTGTAA ATTGCAATAAGTGATTTTGATGAGACAAATATGAAGAATTTATACGACCAGATATAGCATCATTTTAAATCTAGGTGATGATTAAATTCAGATCCTAAGT CTTTGAATATCACAACCTCGGTTAGTTAGTTCCATCAGCTGAGGAAATTTGTAGTAGTGCTATGAATAGGTCTATTAGTTCCTTACCGATGGAACATTCT CTGTGTTAAAGATACTGTCATAAGTGATCTCTCCAAAAAGTTTAAGCTGTTAGGTGAGATAACACAATCAACCTTATTATATGTCTAACACGAGTTTGTT GGATGGAAAAGATCGAAAGCTAGACCAGTCATAGAGGCTCTCATGATGGTGTTATGTCATGAACTAACTTTCCCAGAAGCTTAAGCTGTTAGGGGAAGGA TGAGTGACTTTAACATAGATTCTGATGTTTTTATCAATGACGAGTGCAGGTCAATGCGGTTCTCATAAGTTTTCTGAAAGCAGATTGATGGATCTCCTCC ATGGTTCAGAATATGTGCTCACCTATGAAGACAAGGACGGTGACTGGATGCTAGTTGGAGATGTTCCATGGGAGATGTTCACTGACTCTTGCAAGAGATT GAGGATAATGAAGAGTTCTGAAGCAATTGGACTAGGTTTGATTCACAGACTGACACATTATAATCTCTGCTATGAGTTTTATCATATTTGGATTCTCTTT TCCTAATTTGTACATGTGATCATTGATGAGTTTTCTCAATTCAAGAACTAAATATAAAAGAAAGCATAGATTATAATATCTGAATTATTTAAATAATGGT ATATGAAACTTAAAGAGAAAAGCATGTTATATATCTATAGGCGTTGAATTACATGCCAATTTGTGCAAAAAAATCCTCCAGACAGAAAATGAGCTAGGAG TTTTTATGTGTAAACTATTGTTTATATAGCATTACATGAGCTATTGATGGAATTTGTGATCTCTAGCTTCAAATCTTTCCTCCAATATGATTACACTATA TACAACTCCATTGTCTATTTCATTTTACAATTTTATATGAAATCTTTCCTTCATTTTACACTATATAGAACTCCATTGTCTACTCCAAATTGCCTATTTA CATTCCCTACTAACCAATCATGTTTTTATTGTTCAATTGTACAATATTATGAGATGTCTACCATCTTTTGAAGGTTTTAATACAAGGACAAAACTTAGGT GTTGTTCTTTAGGTGCTTGTGTACTAAAAATATAACATGTCTAACACTTAACATGTGTAACACTATCACACATTTTATATTCTGTTGGTGAGCTATGACA CATCTTCATGTTCTTATAGTGAACACTGAACAGCATGACAAACACCTAAAGATCAGTTTTGTCTTTAATACTATCAATAGCAATGGGAAAATTTATAACA TATGTAGCATCTTTTTTGCTCAAATTTAAGCCTCAATCTGATTCATGCAGCACCTAGAGCCATGGAAAAGAGCAAAAGTCGAAACTAGCACAATGCTGTT GTCACAGAAAGATCCAAACTCACATTTAAGCACATCATATGATACCAGAAGCAGGGCAGGAGTTGGGGCCTCTCTTCCTTGCTTATGTATAATTCTACAT ATGGGATTTGAGCTTCATAGACAAGCATTTATTAGGCAAAATATATTGTTGCAGACATTTAAGGTTTTCTTAGGTTTGTTTCCCTATCATTTCTCTTAAT CACTGTTGTTGTGGACTTCATAAGGCTAAAGCTATGTTTGTATGTAAATTTTGTATTTAAGTAACTTATGCAATATCTCTAAAGTTGATGTAAGTTAGCA TTTTAAATTTCATGTCGAGGAAAAGAAAATAACACCATACTTTGTTTTGTTTCATAAAGAAGCTTTATGGTTTCCCAACTTTTTTGGTTCATGTCATGTC ATGCCATGCTTGTTCCATGATGTAAAATAAGTCTTATTTTGATGTTTCAAAAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_163883; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_420872
| Blastp | Auxin-responsive protein IAA27 from Arabidopsis with 49.02% of identity |
|---|---|
| Blastx | Auxin-responsive protein IAA27 from Arabidopsis with 64.77% of identity |
| Eggnog | auxin-responsive protein(ENOG410YEX5) |
| Kegg | Link to kegg annotations (AT4G29080) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019457845.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |